Pseudomonas sp. RIT288, BW33_RS26235

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT288 contigs8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGTCGATCGCTTTGCGCAGCGACCAGCAGGGCGTCGATGACTTTCAGGCGAATCAGGCTGGTGCGCAGGCCGAAGCTTTTCAGCAGCAGGCGAATGCGC TCATTACCCAGGCGTTCTGGGCTGGGGGCGAAACTGCTCGCGCGGGAACTCATGGCAGCTCCTTGTGACGCCTGGCTACCGTCCGTTGGTAGTTGCGAGT TGTACATGGGGTTACTCCTTTCTAGAGCCCGATCAGGAAACGTTTTGACTGCTCTCAGTAAACAAGACGTTTCAGCACGACAAATCATGAAAGGAAATAT GTAGAAATTTTGTCGCTTATTCGTTGTTTTCCCGTCATCGCCGGTTTGCACCTTGAGTTAACGGGCTAAATATTTTTTTGCCGCATTCGTTTCCTGAACA GCCACCTTGCGCCCAGGCGCAGGCGTCAACTTCAGACCGAGTTCGAAGCTTGCGCAAAGCATGCGTCGATCCGTGTCCTATCTATCGATCAGGAGCGAGT
DNA Sequence for Gene
>BW33_RS26235
GTGATTATTTCCAGGCAGTTAACCGGGCTGGCCCTCGCCAGCGCGTTTCTCGGGCTCAGTCTGTCGGCCCATGCGTTCAGTCCCGCCACCCAGGCCAGTG CCGATATCCGCCGTACCGCGTTTGGCGTTCCGCACATCCGCGCCGAGAACGAGCGCGGCCTGGGTTTCGGCATCGGTTACGCCTTCGCGCAGGACAACCT GTGTCTGCTGGCCAACGAGATCGTCACGGTCAATGGCCAGCGCTCGCGCTATTTCGGGCCGGAGCAGTTCACCGTCGAGCAACGCGAGAATCGCGTCAGC GACCTGTTCTTTACTTGGCTCAATACGCCTGCCGCAGTGAAAGCCTTCTGGGACGCGCAACCTGCGCAGGTGCACGATCTGGTGGAAGGTTATGCCGCGG GCTACAACCGCTATCTCGCCGAGCGCCGCCAGCAGGGGCTGCCGCAACAGTGTCAGGGGGAGTGGGTGCGTGATATCGCCGCCGAGGATCTGGTTAAGCT CACTCGGCGCTTGCTGGTTGAGGGCGGGGTCGGACAGTTCGCCGAAGCCCTGGCAGGCGCGACGCCGCCGCAGGCCACGGCGCAGCTCGGCAGCAATGCG CAGGCCTATCAGTTGGCGGACGCGCGCCTGCAGCGCTTCGCCCTGGATCGCGGCAGCAACGCCGTGGCGGTCGGCAGCGAACGCTCGTTCAACGGACGCG GCATGTTGCTGGCCAATCCGCATTTCCCGTGGGTCGGCGGCATGCGCTTTTACCAGATGCACCTGACCATTCCGGGCAAGCTCGACGTCATGGGCGCAGC CTTGCCGGGGCTGCCGATGATCAACATCGGTTTCAACCAGCATCTGGCCTGGACCCACACCGTGGATTCATCCAAACACTTCACCCTGTATCGCCTGCAA CTCGATCCGAAAGACCCGACCCGCTACCTGCTCGACGGCAAATCGCTGCCGCTGAACAAGCAGACGGTCACGGTGCAGGTCAAACAGGCGGACGGTCAGG TGGTGCCGGTTTCGCGTGATGTCTACAGCTCGCAGTTCGGCCCGATCGTACAGTGGCCGGGCAAACTCGACTGGGATCATCAGTACGCCTACAGTCTGCG CGACGCCAACCTGGACAATGACCGCGTGCTGACGCAGTGGTACGCGATGAACCAGGCGTCGAGCCTCAAGGATCTGCAGGATTCGGTGCACAAGCTTCAG GGCATTCCGTGGGTCAACACCCTGGCCGTGGATGACAAGGGGCAGACGCTGTACATGAACCTGTCGGTGGTGCCGAACGTCAGCGCCGACAAACTGGCCA AGTGCAGCGACCCGCGCATCGGCTTGCAGATGATCGTGCTGGACGGTTCCAACAGCGCTTGCGCCTGGGATATCGATCCGCAAGCTGCGCAGAAGGGCAT CTATGCCGCCAGCCAGCTGCCGCAATTGTTGCGCAAGGACTTTGTCCAGCATTCCAACGACTCCGCGTGGCTGGCGAACCCGGCACAACCGCTGACCGGG TTCTCGCCGCTGATCAGTCAGGACGGTCAACCGCTGGGCCTGCGTGCGCGATTTGCGCTTGAGCGTCTGAATTCACTCGGCAAAAAAGGCCCGCTGGCGG TCAAGGATCTGCAACAGATGGTGATGGACGACAACGTCTATCTGGCGACTCAGGTGCTGCCGGATCTGTTGAAGTTTTGCGCTGCGGATCTGGGGGCGGA CGCGGCCGCGTTGAAGCCGGTTTGCGCGAGTCTCAAGGGGTGGGACGGCCGGGCGAATCTGGATTCGGGCATTGGCCTGGTGCACTTCCAGAACATCATG CAAGTGCTGCAAGCGTCGCCGGATGTCTGGCGTGTGCCGTTCGATCCAAAAGACCCGCAACATACGCCACGCGGGTTGGCGATCGAGCAACCGGCGGTGA GCAAGGCACTGCGTGAAGCGCTGCTGGCGTCGGCCGCCACCGCGCAGAAAATGGGGCTCAAGCCTGAAACCCGCTGGGGCGATATTCAGGTGGTGAGCAG CGGCGCTCAACAAACTGCAATCCACGGCGGGCCGGGAACGCTGGGGATCTACAACGCGATCCAGAGTGTGCCGCGTGAAGACGGCAAACTCGAAGTGGTC AGCGGCACCAGCTATCTGCAGGTGGTGACCTTCGACGACAAGGGCCCGCACGCTCAAGGGCTGCTGGCGTTCTCGCTGTCCAGTGACCCGGCGTCGAAAT ACTCCCGCGATCAGACCGAGGCGTTTTCGAAAAAGCAGTGGAGTGTGCTGCCGTTCACTGAGCAGCAGATCACGGCCGATCCGCAGTATCAGCTGCAGAC CGTTCGCGAGGTGGCGGGCAAGAGCACCGAGGTGGTTGCGCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATCAGCCTGAATGAAAAAGCCGCTGCTCCCAGGGATGGGGCAGCGGCTTTTTTATTGCCCTGAGTCAGTCATGGCAAATGGTGCTCGGTTTCAAGTCTTC GGTGGCTGCCGCGGTATCGAATTGATCACCGGATCACCCTCGTTATTGCGCGTCAGGTAGACCGGCAGCACCTTGGGCAAGGTGTTGACGAGGCCGCCGA GTTCTTTGACGTTGTAGACGCCGCCGACGCGGATCGCGCCGGTGTTGGCGTCGGCCAGTTTCAGCGGTTTGCTCAGGTAGCGATTGATCAGCGGCAAGGC TTCGTTGAGTGCCAGGTTGTCGAGCACCAGTTTGCCGTTGCGCCAGGCCAGGGCGTTGTCGTTGGCGTAGGTCTGGCTGATCTGTGGCGTGTAGTCGCCA TGCCGGTACTGTGCCTGCATGGCCGGCCCCAGGCGCAGACCGTCGCCGGGCAGGGCGGCGTTGCTGGTTACCAGCACCGAGCCTTCGATCAGGTTGACCC
Amino Acid Sequence
>acyl-homoserine lactone acylase subunit beta
MIISRQLTGLALASAFLGLSLSAHAFSPATQASADIRRTAFGVPHIRAENERGLGFGIGYAFAQDNLCLLANEIVTVNGQRSRYFGPEQFTVEQRENRVS DLFFTWLNTPAAVKAFWDAQPAQVHDLVEGYAAGYNRYLAERRQQGLPQQCQGEWVRDIAAEDLVKLTRRLLVEGGVGQFAEALAGATPPQATAQLGSNA QAYQLADARLQRFALDRGSNAVAVGSERSFNGRGMLLANPHFPWVGGMRFYQMHLTIPGKLDVMGAALPGLPMINIGFNQHLAWTHTVDSSKHFTLYRLQ LDPKDPTRYLLDGKSLPLNKQTVTVQVKQADGQVVPVSRDVYSSQFGPIVQWPGKLDWDHQYAYSLRDANLDNDRVLTQWYAMNQASSLKDLQDSVHKLQ GIPWVNTLAVDDKGQTLYMNLSVVPNVSADKLAKCSDPRIGLQMIVLDGSNSACAWDIDPQAAQKGIYAASQLPQLLRKDFVQHSNDSAWLANPAQPLTG FSPLISQDGQPLGLRARFALERLNSLGKKGPLAVKDLQQMVMDDNVYLATQVLPDLLKFCAADLGADAAALKPVCASLKGWDGRANLDSGIGLVHFQNIM QVLQASPDVWRVPFDPKDPQHTPRGLAIEQPAVSKALREALLASAATAQKMGLKPETRWGDIQVVSSGAQQTAIHGGPGTLGIYNAIQSVPREDGKLEVV SGTSYLQVVTFDDKGPHAQGLLAFSLSSDPASKYSRDQTEAFSKKQWSVLPFTEQQITADPQYQLQTVREVAGKSTEVVAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site