Pseudomonas sp. RIT288, BW33_RS20755

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT288 contigs4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTGCTCTGGGTGCTGTTGATCTACTTCGGTACGGTCAACCTGATGCGCAGCCTCGGTGAGTTCTTCGGCAATCCCGACCTGCAACTCAGTGCCTTCGCCG CCGGCGTAATTGCGCTGGGCCTGTGCTTCGGCGCCTACGCCACGGAAGTGTTCCGCGGCGCGATCCTTGCCATTCCCAAGGGCCATCGCGAAGCGGGTGT GGCGCTGGGCCTGTCGAAATGGCGGATTTTCACCAAGTTGATCATGCCGCAGATGTGGCGCATCGCCCTGCCCGGCCTGGGCAACCTGTTCATGATCCTG ATGAAAGACACCGCACTGGTGTCGGTGATCGGCCTGGAAGAAATCATGCGTCACGCGCAGATCGGCGTGACCGTGTCGAAACAACCGTTCACTTTCTATC TGGTCGCCGCAGTCATGTACCTGGGCCTGACGGTGCTGGCGATGACCGGCATGCACTTCCTGGAAAAACGCGCCGCTCGCGGCTTTGCGAGGAGCGCTTC
DNA Sequence for Gene
>BW33_RS20755
ATGAACTGGGAAGTGATCATCAAGTGGCTGCCAAAACTGGCGCAGGGCGCGACCCTGACCCTGGAGCTGGTGGCGATTGCCGTGATAGCCGGCCTGCTAC TGGCAATTCCACTGGGCATCGCCCGCTCTTCGAAGCTGTGGTATGTGCGCGCCTTGCCCTACGCCTACATCTTCTTTTTCCGTGGTACGCCGTTGCTGGT GCAACTGTTTCTGGTCTATTACGGCCTGGCGCAGTTCGATGCGGTGCGCAGCAGCGCGCTGTGGCCGTACCTGCGCGATCCCTTCTGGTGTACCACCGCG ACCATGACCCTGCACACGGCGGCGTACATCGCGGAGATCCTGCGCGGCGCGATCCAGGCGATTCCGCCCGGCGAAATCGAGGCGGCGCGAGCGCTGGGCA TGTCCAGGCCCAAGGCGATGTTCTACATCATGCTGCCGCGTGCGGCGCGCATCGGCCTGCCGGCCTACAGCAATGAAGTGATCCTGATGCTCAAGGCCAG CGCACTGGCGAGCACCGTGACCCTGCTGGAACTGACCGGCATGGCCCGCACAATCATCGCGCGCACCTACCTGCCGGTGGAAATCTTCTTCGCCGCCGGC GTGTTCTATCTGCTGATGTCCTACGTGCTGGTGCGCGGCTTCAAGCTGCTGGAGCGCTGGCTGCGCGTCGATGCCTGCCAAGGGCGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TACTTCCCACGTGTTGACGGGCGAGGACCTACTCGCCCGCTTCACCGCGCTGGATGCTTTTTTGCTTGAGCATCAGGCGCTGTGGAAACCTCGTCCGTTC ACCCATCTTTCGCTTCCATGGGAAACCGCCTACCCCGAATTGGCTTCGTGGCTACGCGGACGATCACTGGAAGATGCAGAACGGGCGCACAACCGGCCTG CCGAGCTCATCGATGCCCCGGAGCCGTTCGCTGCATTGGCGGCGTTGTCGGCTGAGCTGAGCGCGGTCGGTGAGTTGCCGGAACATGCGCTGGAAGCCGC AGGCCATCGATTGAATGTCGATGTGCCGGGGCGCAAGTGGCAGCAGATCGAAGCGTTCGCCAGTCGTTTGTCTTTTGCCTCGCCGCCAACGCATTGGCTT GACTGGTGCTCCGGCAAGGGACATTTGGGTCGACGCCTGTTGGGTGCGGGACAACAGCTGACTTGCGTTGAATACGATCCGGCGTTGGTCGCCAGTGGTC
Amino Acid Sequence
>ABC transporter permease
MNWEVIIKWLPKLAQGATLTLELVAIAVIAGLLLAIPLGIARSSKLWYVRALPYAYIFFFRGTPLLVQLFLVYYGLAQFDAVRSSALWPYLRDPFWCTTA TMTLHTAAYIAEILRGAIQAIPPGEIEAARALGMSRPKAMFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTIIARTYLPVEIFFAAG VFYLLMSYVLVRGFKLLERWLRVDACQGR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site