Pseudomonas sp. RIT288, BW33_RS16580

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT288 contigs24, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCGAGAAGCTCAACGCCACGGCGCTGGCCAGACACCCGGGCTCGACCATCACCGAAACCGAGCTGGAAGAGGAGTACGGCAAGTACGTCTACCAGGTCG AAATGCGTGATCCGCAAGGGCTGGAGTGGGATCTGGAATTAGACGCGGTCACTGGGCAGGTTCTCAAGGATCATCAGGATACGTAATGAAGGTTAATGTT CGCGCCACCAGCCGCACGGCGTTGGCGCTTGTGATTGTTTGCTCGGCGGCGATGGCCCGCGATCTCGATCAGGACGAGGCGTTGAAGCTGCGTCAGCAGG GGGTGATCCTGCCGCTGGAGCAGGTGCTGCAACAGGCGCTGGATCGCTATCCGGGGGCCAAACTGCTGGAGGTCGAGCTGGAAGAAAAGCACGACGTCTA TGTTTATGAAGTCGAGCTGTTGACGGTCGAAGGCGTGGCGCGCGAGCTGCACCTCAAGGCCGATACCGGCCAATTACTCAAAGACAAGGAAGATTGACCG
DNA Sequence for Gene
>BW33_RS16580
ATGCGTTTGCTTCTGGTGGAAGACCACGTGCCGCTGGCCGACGAACTGATCGCCGGCCTGCAGCGCCAAGGCTACGCGGTGGACTGGCTGGCGGACGGGC GCGATGCGGTCTATCAGGGCAGCAGCGAGCCCTATGACCTGATCATTCTCGACCTCGGTCTGCCCGGCGTTCCCGGGCTTGAGGTGCTGGCACAATGGCG CGCCGGTAGCCTGTCGACCCCGGTGCTGATCCTCACCGCCCGCGATTCCTGGGCCGAGCGCATCGAAGGCCTGAAGGCGGGCGCCGACGATTACCTGACC AAACCGTTCCATCCCGAAGAGCTGCACCTGCGGGTGCAGTCGTTGCTGCGTCGCTCCAAGGGCCAGGCCAATCAGCCAACGCTCAAGGCCGCCGGCCTGC ATCTGGACGAAGGTCGCCAGTGCGTGATTCGCGACGGCAGCGAGATTCAGCTGACCGCCGCCGAATTCCGTCTGCTGCGCTATTTCATGCTGCACCCGGA ACAGATCCTGTCGAAAACCCACCTCGCCGAGCACCTCTACGACGGCGAGACCGAGCGTGACTCCAACGTCCTCGAAGTTCACGTCAACCACCTGCGGCGC AAGCTGGGCAAAGCGGTGATCGAAACCCGTCGCGGCCAGGGTTACCTGTTCGGCGGGCAAACTTCGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GATCGATCCAGCGCCGCTTGAGCCTGGGCTTGATCAGCGTGATGGTGATCGTCGGCCTGGTGCTGGCGCAAACCAGCCTGTGGTTGTTCGAAGTCGGTTT GCAGCGTTATCTCGAAGCCGGCCTGCGCAACGACAGTGAAAGCCTGCTGGTCGCGCTGGTGCGTGGCCCGCAAGGTTTGCAACTGGATGAACGGCACCTG TCGCCGGCCTATCAGCGGCCGTTTTCCGGGCATTACTTCCGCATCGATTTTGCCGACAGCCACTGGCGCTCGCGTTCATTGTGGGATCAGGATCTGCCAC TGCTGGAGCACCCCGGTTTGCACAGCAACCTGCAACTGGGGCCGGACGGTCAGCAGTTGCTGGTATTGCGTTCGGACTATCGACGTCTGGGACAGTCGAT CTCGATCAGCGTTGCTCAGGATTACACCCCGGTGCGCGAGAGTTTCCAGCGCATGCGGCAGATCGGCCTCGGTCTGGGCCTGGCCGGTTTGCTGCTGATT
Amino Acid Sequence
>transcriptional regulator
MRLLLVEDHVPLADELIAGLQRQGYAVDWLADGRDAVYQGSSEPYDLIILDLGLPGVPGLEVLAQWRAGSLSTPVLILTARDSWAERIEGLKAGADDYLT KPFHPEELHLRVQSLLRRSKGQANQPTLKAAGLHLDEGRQCVIRDGSEIQLTAAEFRLLRYFMLHPEQILSKTHLAEHLYDGETERDSNVLEVHVNHLRR KLGKAVIETRRGQGYLFGGQTS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site