Pseudomonas sp. RIT288, BW33_RS15975

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT288 contigs23, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAGCTGCCACATTTCGCTGCGATACGAAAGGGAGGTGGCAGCTATACGCGGGTCGCAGACCGGGACTCTAGAACCGGCAGACCCAAAGGTCTCCCACGTA CAGCCGCCATAAAACGGGACGGAAGTTGTGCGTCTAGAAATCAGCGGGCTGCGAGACCCGATCGCTGATTCGTCAGCGACCGATCCACAATAGAGCCCGA CCCCAAGGCGCACAAGCCGGCGGATTCTGGCGTAGCTGTAGGCAATGGCGCAAGGATATGTAGCCTGCAAGGCGTGTCTTGAGGTGTCTTTTAAACACTT GGGTTTAAAGACGTCGCGATTCCTTGATTACGCAAAATCAAAAGATCGCAGCCTGCGGCAGCTCCTACAGGGATCGGTGTAGGAGCTGCCGCAGGCTGCG ATCTTTTTGGTCTGCGCAAAAGTTGGAAGGCTTCTTGCAGTAGCCGCCGTGCGCCTGCTTTGGGCGTCAAAAGTTTGCTTTAAAGGAACGGGGAAAACCG
DNA Sequence for Gene
>BW33_RS15975
GTGGATCGCTCTCAGTTATTCAACACTGCTCGCTCGAATGTTGCCGACCTCAGTCGAGGCAATCTGGGCGTGCCGTTGTTGCTGCTGGTCATGTTGGCAA TGATGATGTTGCCGATTCCGCCGTTCCTGCTCGACGTGTTCTTCACCTTCAACATTGCCCTGTCGATTGTCGTCCTGCTGGTCTGCGTGTACGCGCTGCG GCCGCTGGATTTCGCGGTGTTCCCGACCATTCTGCTGGTGGCGACGCTGCTGCGGCTGGCGTTGAACGTGGCCTCGACGCGGGTGGTGATGCTCCACGGT CAGGACGGCCACGCCGCTGCCGGCAAGGTGATCCAGGCCTTCGGTGAAGTGGTGATCGGCGGTAACTACGTGGTCGGTATCGTGGTGTTTGCGATTCTGA TGATCATCAACTTCGTCGTGGTGACCAAGGGTGCCGGGCGGATTTCCGAGGTGAGCGCGCGCTTCACCCTCGATGCGATGCCCGGCAAGCAAATGGCGAT CGACGCCGACCTCAACGCCGGTCTGATCGACCAGAATCAGGCCAAGGCGCGCCGTCAGGAAGTCGCACAAGAGGCCGAGTTCTACGGTTCGATGGACGGT GCCAGCAAGTTCGTCCGGGGTGACGCCATCGCCGGCCTGCTGATCCTGTTCATCAACCTCATCGGCGGTATGGCTGTCGGTATCTTCCAGCACAACATGA CCTTCGCCGACGCGGGCAAGGTGTACGCCTTGCTGACCATCGGTGACGGTTTGGTGGCGCAATTGCCATCACTGTTGTTATCGACAGCGGCAGCGATCAT GGTGACCCGTGCTTCCGGTTCGGAAGACATGGGCAAACAGATCAACCGGCAGATGTTCGCCTCGCCAAAAGCCTTGGCGGTGGCTGCTGGTCTGATGGCA GTCATGGGCCTCGTCCCGGGGATGCCGCACTTCTCGTTCCTGAGCATGGCCGCGCTGGCTGCCGGTGGCGCCTACCTGTTCTGGAAAAAGCAGAACGTCG CCAAGGTGCAGGCGCTGCAAGAGGTCCAGCGTCAGCAGGAGCTGCTGCCGTCGCCGGCCCGCGCCATGGAAACCAAGGAGCTGGGCTGGGATGACGTGAC GCCGATCGACATGATCGGTCTGGAAGTCGGTTACCGCCTGATCCCGCTGGTGGATCGCAACCAGGGCGGGCAGTTGCTGGCGCGGATCAAGGGCGTGCGC AAGAAGCTCTCGCAGGATCTGGGCTTCCTGATGCCGACCGTGCACATTCGCGACAACCTCGACCTGGCGCCGAGCGCCTATCGCCTGACCCTGATGGGGG TGATCCTGGCCGAAGCCGAGATCTACCCGGATCGCGAGCTGGCGATCAATCCGGGGCAGGTCTACGGCACGCTCAACGGTATTACCGCCAAAGATCCGGC TTTCGGCCTGGAGGCGGTGTGGATCGAAGTCAGCCAGCGTGCGCAGGCACAATCGCTTGGTTACACCGTGGTCGACGCCAGTACCGTGGTCGCGACCCAC TTGAACCAGATTCTGTACAAGCACTCCAGCGAGCTGATCGGCCACGAGGAAGTGCAGCAACTCATGCAATTGCTGGCCAAAAGCTCGCCGAAACTGGCTG AAGAGCTGGTGCCGGGTGTGGTGTCGCTGTCGCAGTTGCTCAAAGTGTTGCAGGCGCTGCTGGCCGAACACGTGCCGGTGCGCGATATCCGCAGCATTGC CGAGGCTATCGCCAACAACGCCGCCAAGAGTCAAGATACCGCCGCCTTGGTGGCCGCAGTACGCGTCGGCGTATCCCGCGCCATCGTCCAAAGCATTGTA GGCACTGACTCCGAGCTGCCTGTGATCACCCTGGAACCAAGGTTGGAACAAATATTGCTCAATAGTCTGCAGAAGGCAGGACAAGGCTCTGAAGAGGGCG TTCTGCTGGAGCCAAGCATGGCCGAGAAGCTGCAGCGTTCGCTTATCGAAGCGGCGCAGCGCCAGGAAATGCAAGGTCAGCCGGTGATCCTGTTGGTAGC AGGCCCGATCCGCGCGATGCTCTCGCGTTTCGGTCGCCTCGCAGTCCCGGGGCTGCACGTGCTGGCCTACCAGGAAATTCCGGACAACAAGCAAGTGACC ATCGTTGCGACAGTAGGGCCCAACGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTAGTGGTTTATGCAAGTTAAGCGTTTTTTCGCCGCCGATATGCGTCAGGCCATGAAGCTGGTTCGTGATGAGCTGGGCGCTGATGCCGCCATCATTGG CAACCGCCGCATTGCCGGCGGCGTCGAGCTGACGGCGGCGCTGGATTACAAATTGTCGGCGCTGGCGCCACGGGTTCCGAACATGGAACTCGAGGACGAG CTGCGCAAGACCCAGTCGCGCATCGTTACCGCCCAGGCCGAACTGAGCCTGCGTGGCGAAGCCGACGGCAACACCAATCGCCAGTTGTTCGCCGGGCTGC CGTTGACGGCCGGCCTGCCGCTGACCGCTGCCGAACCGTTGAGCGAACCGACTTACACCGCCCCGGCGCGTCCGGCTCCGGCACCTGCACCGGCGTCCGC TGGTGTCGATCCGCGAGCGCTGGATTCGATGCGTTTCGAATTGAACAGTCTGCGTGAGCTGATGGAAGTGCAGCTCGGCACGCTGGCCTGGAATCAGCTG
Amino Acid Sequence
>flagellar biosynthesis protein FlhA
MDRSQLFNTARSNVADLSRGNLGVPLLLLVMLAMMMLPIPPFLLDVFFTFNIALSIVVLLVCVYALRPLDFAVFPTILLVATLLRLALNVASTRVVMLHG QDGHAAAGKVIQAFGEVVIGGNYVVGIVVFAILMIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQNQAKARRQEVAQEAEFYGSMDG ASKFVRGDAIAGLLILFINLIGGMAVGIFQHNMTFADAGKVYALLTIGDGLVAQLPSLLLSTAAAIMVTRASGSEDMGKQINRQMFASPKALAVAAGLMA VMGLVPGMPHFSFLSMAALAAGGAYLFWKKQNVAKVQALQEVQRQQELLPSPARAMETKELGWDDVTPIDMIGLEVGYRLIPLVDRNQGGQLLARIKGVR KKLSQDLGFLMPTVHIRDNLDLAPSAYRLTLMGVILAEAEIYPDRELAINPGQVYGTLNGITAKDPAFGLEAVWIEVSQRAQAQSLGYTVVDASTVVATH LNQILYKHSSELIGHEEVQQLMQLLAKSSPKLAEELVPGVVSLSQLLKVLQALLAEHVPVRDIRSIAEAIANNAAKSQDTAALVAAVRVGVSRAIVQSIV GTDSELPVITLEPRLEQILLNSLQKAGQGSEEGVLLEPSMAEKLQRSLIEAAQRQEMQGQPVILLVAGPIRAMLSRFGRLAVPGLHVLAYQEIPDNKQVT IVATVGPNG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site