Pseudomonas sp. RIT288, BW33_RS12920
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0000160 | phosphorelay signal transduction system |
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd17569 | REC_HupR-like | - | - | 13 | 130 | 3.08466E-69 |
| Gene3D | G3DSA:1.10.3210.10 | Hypothetical protein af1432 | - | - | 181 | 373 | 1.2E-32 |
| Pfam | PF00072 | Response regulator receiver domain | IPR001789 | Signal transduction response regulator, receiver domain | 15 | 124 | 8.3E-24 |
| CDD | cd00077 | HDc | IPR003607 | HD/PDEase domain | 215 | 323 | 1.12038E-4 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 8 | 151 | 1.1E-40 |
| SMART | SM00448 | REC_2 | IPR001789 | Signal transduction response regulator, receiver domain | 13 | 125 | 1.2E-30 |
| PANTHER | PTHR45228 | CYCLIC DI-GMP PHOSPHODIESTERASE TM_0186-RELATED | - | - | 11 | 370 | 2.1E-70 |
| SUPERFAMILY | SSF52172 | CheY-like | IPR011006 | CheY-like superfamily | 11 | 177 | 1.71E-40 |
| Pfam | PF13487 | HD domain | - | - | 260 | 320 | 4.5E-19 |
| SUPERFAMILY | SSF109604 | HD-domain/PDEase-like | - | - | 214 | 375 | 5.27E-12 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.