Pseudomonas sp. RIT288, BW33_RS11500

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT288 contigs19, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGAGGTGGTTTCCAGGGCCTGAGCCGACACCGGGTGTTTTTCGGTGTCCATGCCGGACAGGCCGACCAGCTCGCTCGGCAGGTGGAAACCGGTCAGTTGT TCTTCGCCGCTGTCGCTCAGGCTGAAGGTCTTCAGGGCGCCGGAGCGTACTGCATAAACGGAATCGAAGGTGTCGCCCTGGCGGAACAGGAACTCACCCT TTTTCAACGGGCGGCCACGTTTAACGATTTCGTCCAGCGCATCCATGTCTTCCAGATTCAGAGAAAGTGGCAGGCAGAGAGGGGCCAGGCTGCAATCCTT GCAATGGGCCTGGTTGTGAGCGCGCAGTTTGACTGGCTCGGACATTTCTTAAATCCTTGTGGGAAAACACACATAAGACGTAAGGGTAACCCACGGGGGG ACATTCAGGCCAGCCTATGGCGAGTTTGTCCCGCAGGCGTAAAGCCGCAGAGCAAGTGGCCGATAAAGGGGTATCACCACGCATGCAAGGAATCGCTTCG
DNA Sequence for Gene
>BW33_RS11500
ATGGCCGTCATTGACACGCTGAACCCCGGTAACAGCGGCGTTGCGTCTGTGCCGAGCACCGCCAGGACAGGGACCGACAGCGAGCAGAATGCCGCCTCTG CGCCGTTGGCAACCCCGACCTTGGTCGAAGGCGTCAAAGTGTCGCTGTCCGGCGCCTCCATCGAAAAATCCTTCAGTGTCGGTGGCGAGAACAGCGACAT CGAAGACAGCGGCTTGCCCGAGAACGTCCAGCAGTTGCTGAAGATGATCCGCAAACTGCAAAAAGAGATCGCCGAGAAAAAAGCCCGGATGGCGGCGGTC ATGTCCGACAGAACCCTGACCAATGAAGCCAAGGTCAATATGCTCGCCGCGCTGCACGGTGCCATCGCTGCGCTGAATACCGGGCTGATCAGCGCCAATC TGGCCCTGTCCAAAGTCATGGATCAGTCCGGTCTCACCTCCGAGCAGAACCTCAAACTCGGCTCACTGCTGACGAAGAACTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATCACCCGCGAAAAACGCTGGCGGTTCTGCTGCTCCAGATAGGCGTCGAACACCATGCACACCGAGCGCACCAGCAGGCGTCCGGCCGGCAACACTTCGA TGCGCTCGCGTTCCAGCTTGATCAGCCCATCGTTGGCCATGCCTTGCAGTTGCGGCCACAGCGCGCCGAAATAGCCCTGAAAATCGATGTTGAACGCTTG CTCGATTTCGGCGAATTCCAGGCTGAAATTGCAGATCAGTTGCTGGATCACCGCGCGGCGCAGGCGATCGTCGGCATTGCACACCAGGCCACGGCTGGTC GCCAGTTGCGCGGCGGCGAGGGTGTTCTGGTACTGGTTCAGATCGCTGTTGTTCTGACAGTAGAGATCGCCGATCTGGCTGATCGCCGACACTCCCAGAC CGATCAGATCGCAATGACCGTGGGTGGTGTAGCCCTGGAAATTGCGTTGCAGGGTCTGTTCTTCCTGGGCAATCGCCAGCTCATCGTCGGGCAGTGCGAA
Amino Acid Sequence
>hypothetical protein
MAVIDTLNPGNSGVASVPSTARTGTDSEQNAASAPLATPTLVEGVKVSLSGASIEKSFSVGGENSDIEDSGLPENVQQLLKMIRKLQKEIAEKKARMAAV MSDRTLTNEAKVNMLAALHGAIAALNTGLISANLALSKVMDQSGLTSEQNLKLGSLLTKN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site