Pseudomonas sp. RIT288, BW33_RS09935

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT288 contigs17, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTATTTGTCCTGGACATGGGCGAGCCGGTGAAAATCGTCGAATTGGCGGAAAAAATGATTCACCTGTCTGGATTGAGCATTCGCTCCGAGCGTAATCCAC AAGGAGACATCTCCATTGATTTTACGGGGCTTCGTCCGGGAGAGAAGTTATACGAAGAGCTGCTGATCGGTGACAACGTGGCAGCCACACCGCACCCGAT GATCATGAGTGCCAGCGAAGATCATTTACCGTGGGACTTGCTCAAGCTTCGTCTGACGGATTTGCTGGCTGCCGTCGAGCAGGACGATTATGCCCGCGTC CGCCAACTCCTGCGAGAAACTGTCAGCGGCTACACCCCCGACGGCGAAATCGTCGACTGGATCTATCAGCAGCGCCGCCTCGAACCCTGATTGTTTCACA TCCTGTAATAGACGCATTTTTGACACCCGCCAACCATCGCCTAAGTTTGGAGAGCAGCTTCGGAAAAGCTGCTTTCTCAAACGATGATGGAGCGTCATTT
DNA Sequence for Gene
>BW33_RS09935
ATGCGTAACGGTTTTTTCTACTCTCTGGTTTTCGCCTTCCTCACCAGTGCTTCAATCGCTGCTATCGCAGCACCTGTCGTTGTCCCTCAAGCGGAAAAGG CAACGGTGGTGGCGGAGGCGGTGACGGCATTCCCAAGTGAGAAGGTCGATCTGAACGGTGCCGATGCCGCGACTCTGCAGAAGCAGTTGGCTGGAGTCGG TGAGGCGAAAGCCAAAGCCATTGTTGCGTATCGTGATGCTAATGGGCCATTCGCCTCGGTGGATGAGCTGCTGGAAGTGAAGGGCATCGGCAAGGCGATC CTCGATCGCAACCGCGACAAGCTGGAAGTGAACTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCTGATTACTTAACGCCAAGGGGCCGGTCATTGACCGGCCTTTCTGCTTTCTGGGTGGCAGCGATGCGACAGAGGGAGCGGCGTCGCGTTTGTCGGTGAG CTGAAAATTATAGGTATCATATTTTCTTTGGATTATGCCTATAATAATTTCCGTCGCCTCCACGCCAGTGAGCGTTGGAGGCCTATCTCCCAATATGTTT CAGGAGCGCTCTCATGGGTTCAGTCCAGTCTCAAGGTACGGCTGTCGTCACTGGCGCATCGTCCGGTATCGGTGCCATCTACGCGCAACGGCTGGCAACG CGTGGTTTTGATTTACTGTTGGTGGCCCGTGATCAACAGCGTCTGGAGAACGCTGCCAGCCAGTTGCGCGACGCCCACGGTGTAAAGGTCGAAGTGCTCA AGGCCGACCTGACGCAAAAGGACGATGTCCTCAAACTCCAGCAACGCCTGCGCAGTGACTCGAGCATCACTCTGTTGGTAAATAACGCAGGAGTTGCAGC
Amino Acid Sequence
>competence protein ComEA
MRNGFFYSLVFAFLTSASIAAIAAPVVVPQAEKATVVAEAVTAFPSEKVDLNGADAATLQKQLAGVGEAKAKAIVAYRDANGPFASVDELLEVKGIGKAI LDRNRDKLEVN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site