Strain | Pseudomonas sp. RIT288 contigs15, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCTACCGCAAATACACCGCGACCCTGAGCTATCTGCAACCGTTCAAGGTGTGGGGCGAATCCTTCACCTTCAGTAGCCTGATGACTGGCCAGCGCAGCGA GGACGTGCTGTTCAGTTCACAACGCACCAGTCTCGGCGGGCTGTCGTCGATCCGTGGCTACAAGGATCAGTCGTTGTCCGGCGACAGCGGCGGCTACTGG CGCAACGACCTGCGCTGGAGCCGTCCGGTGACGGCCGAATGGCTGCGCCCGGTGTTCGCTGAATACGGCACCAGCCTCGGTTACGACCAGGGCGTGATTC GCGGCGACCGCTACAACGGTGATCAGCACGGGCGCATGTCGAGCAACTCGCTGGAACTGTTCGCCCGTGGCGAGCACGTGGCCGCCAGTGTGACCTTTGC CCATTCCCTGGAACGCCCGGATGTACTGACCGAGCGTGAAGCGCCGATCTATTTCCGCCTCGACTTTTTCATCTAATTCAAATTCTTCGAGACCATCGAC
|
|
DNA Sequence for Gene |
>BW33_RS08650
ATGGATGTTCGTCAGTTCGCCTTCCTTGCAGGCCAGCCTTCTGCGGCCGTAAAAAACCGTGAGTCGTTTCTGGGCATGCCCAAGCGCGGGCTGGCGTTCC TGCTGGCGAACGTCATGTTCTGGCAACCGATGTGGGCGCAGGCCGACGGCATTGTCGTGGCCAACCCGAACACCGCGCTGGATCGGGCCGGTAATGGCGT GCCGATCATCAACATCGCCACGCCCAACGGCAGCGGGCTGTCGCATAACCAGTTCCACGATTACAACGTCGGCGCGCAGGGCGTCATCCTCAACAACGGC TCGACGCAGACCTCGAACACCCAGTTGGCCGGGCACATCATCGGCAACCCGAACCTGAAAAACAGCGGCTCGGCGCAAGCGATTCTCAACGAAGTCATCA GCGGCAACCCGAGCCAGTTGCGCGGTTACACCGAAGTGGCGGGGCAGTCGGCGCGAGTGATCGTCGCGAACCCGTATGGCATCACCTGTAATGGTTGCGG TTTCATCAACGCGCCGCGCGTGACGCTGACCACCGGCAAACCGGTGCTGGATGGCGCGGGGCGGCTGGATCGTTTTCAGGTTGATCAGGGTTCTGTTGCC ATCGAAGGCACCGGGCTTAACGCGACCAACGTCGACCGCTTCGAAATCATCACCCGTAGCGCCAAAATCAACGCTGAGCTCCAGGCGCAGAACCTGACCA TCGTTGCCGGGCGCAACGACGTCAACGCACAGACCTTGAACGCCACGGCCCGCGCCGACGACGGCAGCGCCAAGCCGCAACTGGCAATCGACTCTTCGGC ACTCGGCGGGATGTACGCCGGGGCGATCAAACTGGTGGGCACCGAGGCCGGGGTCGGGGTGAAACTGGCGGGCAACCTGGCCGCCAGTGGTGGCGATATC CAGATCGATGCCAACGGCCAGTTGACCTTGGCGCAGACCTCGGCAGCCACTGCCGTGAACATTAAAGCCAACAGCCTTACTGCCCAAGGTCCGGTCTACG CCGGCACCGCACTGAGCGTGCAAACCCAAGGCGATCTGAGCAGCCAGCAAAACCTCGCTGCACGCGACAGCATCAGCCTCAGCGCCGGTGGAACCCTTAG CAACAACGGCATCATTGAAGCCGGGGTCAACGCCGACAACAGCCGTAACAGCGCTGGCGACGTGAACCTGAGTGCGCAGAACCTCAACAACAGCGGCAAA AGCGTGATCGCCAGTCGCAACCTGACGGCAACCGTCGCGCAAACCCTGAACAACCAGGGCGGTACGTTGAGCGCCCAGCAGAGCACGCGCCTCACAGCCA CCACTCTGGACAATCAGAACAAGGGCAGCGTCCTCGGTAACTCGACGGTGCAGTTGAACGTCAGCAAGGTCATCAACACCCAGGGTGTGATCAGCAGCAA CGGCAACCTCGGCGCCGATCTTGGCGACCTGAATAACCACGATGGCGAGATATCCAGCGCCGGCACCACCCGTATCGACGCCATCACGCTGGACAACAGC GGCGGCCAGGTGACGGGTGACGTAGCGCTGAACATCGGCTTGATTGGCGCGCTGAACAACCGCAACGGTGTGTTGGGCTCGGGGGTGAATGTCAGCATCA CCGCCGCCAGCCTCGACAACAGTCACGAAGGCAGTCTCGTCAGCGACGGCAGTCTGACCGCGCGCATCACTGGCTTGTTCGATAACCAGAACGGTGAGCT GAGCGCCAAAGGTGCAGTCGATGTCCAGAGTGGCAGCCTCGACAACCGTGGCGGCAGCGTGGTTGGCAAGGATCGCCTGACCCTGCGCAGCAATTCAGTG GACAATCGCGGCGGAAAAATCCGCGCGACCAAAGACCTGCAACTCAATGTTGGCGCGCTCGACAATCGCGATAAAGGTCTGCTCGATGGTCAGGCCGCCG TCAACTACAGCGGCACACAACTGGATAACCGTGGCGGCTTGCTCAGTGCGGCAGGGCCGATGATTCTCGGCGTGACGCGCATCGATAACAGCGCCGGGCG CATCTCAAGCAAAGCCGATCTGAACGCCAACGTGACGCAATTGGTTAACCAGGGTGGTGAATTGGTCGCCCAAGGTTCGTTGTTGCTCAGTGGCCAGTCG CTCGACAACCGTAAGGCCGGTCTGGTCGGTACCACAAAAGCGCTGAAACTCACGGTCGGCGAGATCGACAATCGCGGTGGCGAAATCTCCAGCACCGTCG ATGTGACCGTCATCGGTCAACGCCTGAACAACAGTGACAGCGGCAAAGTCCTCGCCGGAACCACCCTTGGCCTGACTGTGGCCCGGGTCATCAATCAGAC CCTCGGACAACTGTTCAGTGTTGGCACTTCGACGCTGATCGGGCAGAGCCTGGATAACAGCGGCGGTAGTTTCGTCACCCGACAGGGCAATCTGGACATT CGTCTCGACAACGCCTTGAGCAATATCGAGGGTCTGATCAGCAGCGAAGGGACGCTGACCGTACACGCCGGCAGTCTCGATAATACGCGCGGTCACTTGA CGAGCGCCGGCGCGCTGGCGCTGACCAGCACGGGCAGCCTGAACAATCAGACGGGTTCGATCGCCACCGACAGCGGGCTGATCCTTGCTTCAAAAAGTCT GGATAACAGTCAGGGCGGCTTGATCAGCGGCAAAAAAGCCACCGCGCTGACCACCGGCGTCTTCAACAACGCCTCCGGCGGCAGCCTGGTCAGCGGTGAC ACCCTTACGCTCAACGCCGGCGCAGTGAGCAACGGCATCGGCAGCCGGATCGCTAGCGAAAGAGCACTGACCGCAACGGTCACCGGCTTCGATCAGCAGG GCGGTCAACTGTTCAGCAAAACCTCCCTGAGCCTCGACCTCAATCACGGCCAGTTGAACAACCGCAATGGCCTGATCAATGCACCGTTGCTGGTGCTGAA AAATCTCCAGGACGTCGACAACCAGGGCGGTGAAATCTCCAGCGCCCAGGCCTTCACCCTGACCGCGCAAAACCTCGATAACAGCAACAACGGCAAATTG ATCAGCAATCAGGGCCTGACCCTGCGCATCGAACAACTGCTGGCCAGCGTCAAGGGCCTGATTTCCGCGCAGAGCGTGGATGTCAAAAGCGCTCGCCTGG ACAACAGCGGCGGCCTGATCACCAGCCGTGGCACCCTCGGGGTGACGGTGGACGGCCAACTGGTCAACCAGGGCGGTACGCTGATCGCTGATGATGAACT GAATCTGAAAGCCGACAGCGTCGACAACAGCGAAGGGCACATTGCCGGTAAAGCCGACGTTATCGCCAACGTCGCGACCCTCGATAACCGACACGGTGAA CTGGTGGCAACCGACGGGCTGAAGCTCACCGGCAACAGCCTCGACAACCGTAACGGCGGTCTCGTCGGGGCGAATCAGGCGCTGCAACTGATGGTCGATG CCATCGACAACCGTGGCGGTGAGCTGTCCAGCCAGGCTGACGTGACGTTGGTCGGCAGTCGTCTGGACAACAGCGATGGCGGTAAGTTGATCGCACAAGG TGCTTTGAGCCTGACCGTTGATGAAGTGCTCAACCGTGCCAAGGGGCTGATCTCGGGCAAGACCGACCTGACCCTGACCGGCCGCAGCCTCGACAGCACT GCGGGTGCACTCCTGAGCCAGAGCAACCTGAAACTCGACCTGAGCGGCGACCTGAATAACAGTCAGGGCCTGATCAGCGCGGAAGGCAGCCTTGGCGTGA CAGCGGCGAGTCTGACCAACAACCTCGGCAGCCTGTCGGTTGCCGGGCCGTTGACATTGACCACCAGCGGCGTGGTGCTCAACCGTGGTGGTCAGATCGT CACCGACGCCAGCCTCAACCTCACCAGTGCCAGCCTCGACAACAGCGACAATGGCAGCATCAGCGGCAAAGGTCCGGTGGTGGTGCATACCGCTACACTG GATAACAGCCACAACGGCCGCCTGAACAGTGGCGACACGCTGGAATTGAAAGCGACCCAAGTGACCAACCAGGACGGCGGTCGTATCGCCAGCGTTGCTG CGCTGACCGCGAACGTCACTGGCCTCGATCAGCAGGGCGGCCAGTTGTTCAGCAACACGTCGCTGGATCTGGACCTCAATCACGGTCAACTGAACAACCA GAGCGGCTTCATCAGCGCGCCGTTGCTGATGCTCAAGAACCTCCAGGACGTCAACAACACCGGCGGTGAAATCTCCAGCGCGCAGACGTTCACCGTGACG GCGCGCAGCCTCGACAACAGCAACGGCAAATTGCTCAGCAATCAGGCCGTGACGCTGCGCATCGACCAGGCGCTGACCAACATCAAAGGCCTGATTGCCG CGGCTGCGCTGGACATCAAGGCAGCCAGTCTCGACAACAGTGGCGGCACACTGACCAGCCGCTCGAGTCTGGACCTTAACCTCGACGGCCTGCTCACCAA CCAGAACCTGGGTCTGATCAATGCCACCACCGGCCTGACCATCAACAGCAACGGCCTGAACAACCAGAACGGCTCGCTGCTGGGCAGTGCCATCGCCATT GATTTCGGCGCGGCCACTGCTGATCTGAACAACGACGGCGGCCTGATCACCACTGAAGGCCAGTTGAGCATTCAGCACCTGCGTGACCTCACCAACCGCA GCGGCAAGATCGCCAGCAGCCAAAGTATCGACCTTGTCGCCCGCAGCCTCGATAGCAGCAACGGCAAGCTGGTCAGCAACAATCTGCTGAATCTCAACAC CGGTGCACTGGTCAACCAGAACGGGGTGATCTCCGGGGTGCAAGGCCTGACGGTCAACGCCGCGAGCCTCGATAACCGCAACAAGGGCACGCTCTCTGCC AGTGATGGCAACCTCAGCGTGACGTTGAGCGGGGATTTGCTCAACAGCGGCGCGGGGGCACTGGTCACCCAGAAAAATCTCAGCGTCACCGCAGCGAATC TGGATAACAGCAACAACGGTGTGGTCTCCAGTACGGGTGCGCAAACCCTGACCATCAACGGTCTGCTGAACAATGCGACGGGTGGCCTGATCTCTACCGA TGCGAGCCTGGCGATGCAAGCCATGACGCTGGGTAACGCCGGCGGCACCGTCAATGCCACGCAGGATCTGAGCTTCACCGGCACCGCCCTGGACAACACC GGTGGCAGTCTCGCTGGTAACGCCGCCGTGACCCTCGACCTGCTCGGTGCCCTGACCAACACCAACGGCAAGCTCGCCAGTGGTGGCACGCTGTTGCTGC AACGCGCCACGCAGATCAACAACCAGGGCGGCCAATTGGCGAGCCAGAGCCTGATGACCCTGTTGAGCGGTGGTCTGGACAACCGCAACCGTGGCACCGT CGCCGCCAGCGGCCTGTTGACCATCACCACACCGGGCGCCATCCAGAACAGCGCCGATGGCTTGATCTACAGCCAGAACAGCGACCTGCGAATCCAGGCC GCCAGCCTCGCCAACGCGAAGGGCACCTTACAGGCGAAAGGTGCAGTCACCGTTGTCAGCAACGGCGATATCGACAACCAGAGCGGTCGAATCCTCGCCA CCAACGGTGATCTTTCCATCGATGCCGGCAATCTGGACAGCCGTGGCGGTGTTCTCGCCAGCCTGCAAGCGGCGTTCACCGCACGCCTGACCGGAGTGCT GAAAAACGGCTATGACCTGAACAACAATCGTCAGGGCGGGGTGATCCAGGGCCAGCGCTTGAACCTCAATGCGGCGATGGGCCTCGACAACTATGGCGGC CGTATTTCCGCACAAAGCGGCGACGCCATCGTCGTGACCGGTAACTTCGACAACCGCAACGGCGGGCTCTACGCCAAAGGCAAAATCAACGTCACCGGCA ACAACTTCGACAACAGCGGCGACAACGACGGCCAGATCGCCGGCCAGCAGATCGACCTCAATCTGACCGGTGAACTGAACAACCGCCTGGGCATCATCGA AAGCGACAGCACCCTTGCCATTAAAGCTGCCAGCCTCGATAACCAGACAGGCCAGTTGCGTGCTCTCGGCACCAGCGGCAAAACCAGCTTCCAGATTGGC GGCCTGTTCGACAACCGCAACGGCACACTGGAAACCGCCAACACCGACCTGACGCTCGACGCCGGCAGCTTCCTCAATACCGGTGGCAGCCTGTTGCACG TCGGTACCGGCACGTTCGACATCTCCACCAACAACGTCATCAACGCCGGCGGCACCCTCGTGACCCGCGGCGGCCTGACCATCAGCACCGATACCTGGAC CAACAGCAGTTCGATTCAGGCCGGGCGCTTGACCGTCAACGTCAACCACCTGACCCAGACGGCCAGCGGCCAATTGCTCGCCTCCGACAGCTTCACCGGC ACCGGCATCAACTGGTTCAATGAAGGCCTGCTGGCCAGTGACGGCAGCATGAATGTCGGCCTGGGTGCCGCTTATTGGGGGGCAGGGCGCCTCACCAGTC AGGGCGATCTGACCCTGAACGCTGCACAAGTGAGCCTCAACAGCGTCAATTCCAGCATCGCCGGGGGTGGCCAGACCACGCTCAATGTCAGTGGCCAACT GGACAATGCCGGTCGCCTGACCTCCGGTGCGGGCATGACCATCAATGCCGGCGGCGTGCGCAACTATGGCACCACGGCCGCCGGCACTGACCTGACACTG ACCACTGGTAATCTGGTCAACGCCAGCGGTCTGTTCTTCAGCGGCAAGGACATGTCGTTGCGGGTCGCCGATCTGAATAACAGCTACGGCAACATTTACA GCCTCGGCAATCTGACGATTGACCGCGATGGCCGTGGCGGGTTGGCCAACTCCATCGTCAACCGTTCGGCGTCGCTGCAAAGCGATGGCAGCATGACGCT GGCAGCGAGCTCGATCCAGAACATCCGCGACGTGCTCACGGTCAACAACGCCGGCATCTACACTGCGCGGATCGGTGAAGTCACCTGTATCGAAGGGGTG AACGCCGGTGACTGCAGTGGCAAGCAGAACCACGCGTGGGAAATCGTACAGCGTGAAAAACTCGAGGTTACCTCGGCCAGCGCCGCGTCCAGCATTACCG CTGGTGGCAACCTGACCCTCAATGGCGGTGACCTGCTCAACCAGAGCAGCACCATTGCCACCGCGGGCAACTTCATTGCCAATGTGGCGAACCTGACCAA CAGCGGCGTGGAGACCGGTGAAACCGAAACCACCCGGATCTACATGTCCCAGCGCACCAGCAATGCGGGTGGCTGGTACAGCGCCGCCAGCGCCTTCACC AATCAGTACTGGTATGAAAGCAGCGGCTACAACGTCAATAATCTGGGTGGCCTGCAGGGCGGTATCGCGAACTTCATCGGCATGACCGAACGGGAACTGC CGGAGCTGGGCAGCACCCGCAAAATTGCCTCCAGCGACCAGAGCTACGCCGCCGTGATCCAGGCCGCTGGCACGGTCAATATCACTGCCCAGAACAACAT CGATAACAGTGTCGTGCGTCCGGGCTACACCTATATCGGCAGCGGTCCGCGAACCGGCACCGGGGCGGGTGGCAGTCAGTTCTCCACACGGGTTACCGTC AATCAGCAACTGCCTCCGAACCTTGCCCAGCAGCAAGTCAACCCGGTGGTGTTGCCTGGCTTTGCACTGCCGACCGGGCAAAACGGTCTGTTCCGCCTTA GCGGCCAGGAAAGTACCGCGCCGGTCGCGACCGGCCCGCAGAGCTGGACAATGGGCGGCGCCAGCGTCAACCTGAGCCAGCGCGATCAAACATTGCCAGG CGTGCAGACACGCAACATTCTCCTGACCAACAATGCCTCGGCTGCGGCCAGCAGCGTCAACCTGAGTACCGCCGATCACCAGGCCCAGCAACCGGGCGTT GGTACCAGTGCAATCGACGTCAGCACGCCAGCAACTGACGTCAGCGGCGCGACCCTGCCGGGGCGCTCCACTGCGTTCACCATCAACCGGGTGCAGGGTG TTCCGACCAGTGCGGGCACATCCAATCCGCAGAAATACCTGGTCGAAACCAACCCGGTACTGACCGACCTCAAACAGTTCATGAGTTCGGACTACCTGCT GTCCAAACTCGGTTACGACCCTGATCAAAGTGCCAAGCGCCTGGGTGACGGCTTCTACGAGCAGACCCTGGTCCAGCAAGCCGTGGTCGCCCGTACCGGT CAACGTTTCATAGATGGGCAGACGTCCAACGACGGCTTGTTCAAGTACCTGATGGACAACGCGCTCACCAGCAAAAACGAGCTTAATCTGGCGGTGGGCG TCAGCCTGACCTCCGAACAAGTCGCGGCCCTGACCCACGACATCGTCTGGATGGAAAACGCTGAAGTGAACGGCGAGCAAGTGCTGGTGCCGGTTCTGTA CCTGGCCAACGCCAACAATCGCCTGGCCCCGAACGGCGCCTTGATCCAGGGCAGCGACGTGACCTTGATCGCCGGCAAGGACCTGAATAACGTCGGTACT TTGAAGGCCAACAACAACCTGTCGGCCACCGCCACCAACGATCTGGTCAACAGCGGCCTGATCGACGCGGGCAATCGCCTCGAGCTACTGGCTGGCAACA ACCTGATCAACAAATCCGGCGGCGTTATCGCGGGTAAAGAAGTCTCGTTGACCACCACCCGTGGCGACCTCATCAACGAACGCACCGTCACCACCCACGA AAGCGACAGCGGCTACCGCAGTGAGCGCAGCGATTTTGTGGACAGTGCAGCGCGTATCGAGGCAGCCAACAACCTGACCATCAAGGCCGGGCAGGACTTC AACAACACCGGTGGCGTGCTTAAAAGCGGCCTGGACACCACGATCAATGCCGGGCGTGACGTCAACCTCGTTTCGGCTGAGCAGGTCTCAGGCGGGCAGC GTGGTTTGCACACGGATCAGACGATTACTCAGTATGGTTCGGCCATTGATGCAGGGCAGAGTCTGATCGTCAACGCCGGTCGCGACATCACTGCCATTGC CAGCCAGATTGGTGCCAAACGCGACGTAGACATGAGTGCCGTGGGTGACTTGACCCTGGCCTCAGCTGCGGATGAAGAGCACTCGTACAGCAAAACGAAG AAGGTGACGAGTCAGGAGGATCATGTCAGTCAGGTTTCCACGACCCTGACGGCTGGGGGGACTGTCTTGCTCAACGCCGGTAAAGACTTGAGCCTGATTG CCAGTCGTGTCAGCGCCGGGGATGAGGCTTATCTGACGGCGGGTGCCAATCTGGCGCTGCAATCGGCAGAAGACACCGATTACAGCTTCTACAGCAAGAC CAAGAAAACCTCCTCCGGGAAGAAAAGCCGCCTTGACGAGGAATCCAGCACCACCAATATCGCCAGTTCGGTAACGTCGGGCGGTAATGCAACGCTGGTT GCCAATAACGACATGCTCATCAAAGGCAGTGAAGTTGCCTCTGACAAAGGTGGTGTGAAACTGGTTGCAGGCAATGACATGCAAATCGTTGCTGTCACTG ACTCACAAAGCGTCCGCCATGAAAGCAGCTCCAGCAAAAGTGGTTGGGGAGGCTTGAAGTCGAGCAAGGTCAAGGATCAGGTTTCCGAGACGCAAACGAC GGCGGTCGGCAGCATGATTTCGGGTAACACTGTAGATGTGGTGGCCGGCCGAGACGCGACGATTACCGGATCAGCCTTGGTCAGCACTCATGATCTGTCA GTGCAGGCCGGTCGCGACTTGACCATCAACGCCGCGGAAAACACCTTTACCCGTAATGAACTGCACAAGGAAAAGAACCGCGATCTGACCGGGGTACTGA CCGCTAACAACCTTGGCGTCGATGACATCACCGGTAACCAGCACTTGTCTGTCAGCAGTCAGAATCATACTGGCCAATCGTCCCAGACCACTTTGACCGG TAGCACCATTGGCTCCAGTGCTGGCAACGTAACCCTTTCCAGCGGGCGCGAGTTGAGCGTGATCGCCAGTGATCTGGTCAGCACCAAGAACATGAGCCTG ACCGGCTCCAAGGTAACCATCGCTGCGGGCATGGAAAGCTCGAGCCAAAGCAGTACCGACAAATCCAGCAGCCTGGGGGTAGGCCGGGTCATTGGCGGCA TGATCGTTGATACGGTCAATACCATTCACAACTCGGTCGAAGCGGCGAAAAGCGCCGACGACCCGAGGCTTAAAGCGGTCAAATATGCTCAAGCCGCCAT GGCGCTGAACGACCTCGGCGGGATGGGGGGAAGCGCCGAAGGTGCAGGTTCCGACTATGGCAAGAAACAGGGTTCCGCCAGCAATGGTTCGTTGATAAAG ATCGGTACTGAACTGGCGAATACCCACAGCAAGAGCACTAGCGAGTACAACAGTCAGACAGCGAAACAAAGCACGATCAATGCGGGCCAGAACCTGCTGA TCATCGCTGATGGCGGTGCGCCGGGAACGGCCGGTGATATTCATATTGTCGGCAGCAGCTTGAAAGCCGCCGATACTGCGTTGATTGCCAAGAACAACAT CGTTCTGGAAAGCGCGCAGAACACCGCTGACTGGGCCAACAACGGCAGCAATAACAAAACCGCCATCGGGGCGAGCTTCAACCTGGGCGAACAGAACGGC TTCACCCTTGACCTCGGGGCGTCTGTTGCCAAAAACACAGGCACCGGCAGTTCGGTCACCCAGGTCAATACCACTCTGGATACCGGCTCTCTCTCCCTGC ACAGCGGCAATGACACCACGCTGGCAGGTGCACAAGTCCGAGCCGACAGTATCAAGGCCGTGATCGACGGCAACCTCAACATCATCTCGCGTCAGGACAC CGAGACCCAGAGCAGCAAGCAGGGCAGTGCCGGTATCGGCGCGAGCATCTGTATCCCGCCATTCTGCTATGGCGCAACTGTGACCGGGTCTGCAAGCCTT GCCGCCGGCAACATGAACAGCGACTACAAAGCCGTGATCGATCAGAGCGGTCTGTTCGCCGGCCAAGGTGGATACGACATCACTGTTGGCAAAAACACCA CCCTGCAAGGCGCGGTCATTGCCAGCGAAGCGACACCGGAGAAGAACCTGCTCAGTACTGATCGCCTGTTCGTCAGTGACATCAAAAACACGAGCGATAT CAGTGCCCAGTCGGCCGGTATTTCGTTGTCTTACGGCGGCAAGTCCGGCACCAGTGTCGGCGGCAGTATTCCGCTGGCGCTTGAAGATTCGGATCAGAGC AAGACCCGCAGTGCCGTCAGCGAAGGCACCATCATCGTTCGCAACGCTGCAGGCGTGAACGATCTGGTGGGTCTGAATCGTGATACAGCGCATGCGAATG AGGCACTGGACAAACCTGATCAAAAAGCCATTCAAGAGCGGATTGATCTGATTCAGAGCACGGTCTCGCTGTCGCGAAACATCATCGGCAAAGTGGCGAG CGCACAGCAGCAAGCGGCTGCTGACAAACTGAAGGCGGCCACCACCGACGAAGAGCGTAAGGCTGCACTCGATGAGTACACCAGTTGGGGGGTGGGCGGC GATAAACGCATAATGGCGGATGTCGCTGCTGGCTTGATTGCAGTGGGCTTGGGGGGCGTTGGCGGTACGACAGCGATCGGTGTCGTCGCCAATACCTCGG CTAACGATGCGTTCAAGAAAATCGGCGATTACGCCAGCCAACAAGAACGTGATGCTACCGACCCCGTGACCCGAGCAGCTTGGGCTGAAGGCGGGGCGGC ACGCGTCATGTTGCACTCGCTGGTTGGCGCGGTGATGGGGTTGTCGGGCAGCAGCGTCGCAGCCGGCGCACTGGGTGCAGGGGTCTCAGCGGCTCTGATG CCGATGATTGCAAAAGCCCTGAAAGATAGTGACCTCAGCGCCAAGCAGCAGGATTCGTTGGCTACCTTGATTGCTTCGGGCCTAGGCGCGGCAGCGGGAT CTGGTGGTGGAGCAACGGGCGCGACGACTGCGGTCACCAGTGCAACCGGTGTCGAGATGTTCAATCGACAATTGCACAAGCAACAGGAAATCCCGCTACT GAAGAAAAAAGCTGAGGAGCTGCAAGCGCGTGGAGGATCGCGCTCGGGCGCTCAGTGGGAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GATTTGTTACTGCTCGCAGCCGGTGCTGAAGTAGACGCTGCCGGTCTCGCACATCTGAAAAGCGTAATGCAAAACGCTGTCGGTAATGATCCGGAGTCCA GGAACTTCGCTGAAGATATGGGCGACGCCTATGCAGCAATCAGCCAATTGTCCGGTCAAAAAATCCCGCTGACCTGGAGTGATGGTCGACCGATTATTGC CAACGGAGCACCGGTTTACGCGTTCAGTGCGACAGATGCGCAATTCAATGACTCTACCTTGTTCAATGCTGCCGGGACCTATGGCCCGGGAGCTGTGTAC CAGCACTGGAGTCAGTTCGGTAAAGACCAGACGACTCAGTATGAAAACGAGCTATCCAGCATTTCGACCTACGCGTCTGATTTAGCGAACACTGCTGAAC GACTGTCGGCCATTTCGGGCAAAGGAATATTGTCATCCACAATTATTGATGATGTACTCCTTTCGATGACTGGGATTCGCAGTGGCAAGGTCGTTATCGA
|
|
Amino Acid Sequence |
>hemagglutinin
MDVRQFAFLAGQPSAAVKNRESFLGMPKRGLAFLLANVMFWQPMWAQADGIVVANPNTALDRAGNGVPIINIATPNGSGLSHNQFHDYNVGAQGVILNNG STQTSNTQLAGHIIGNPNLKNSGSAQAILNEVISGNPSQLRGYTEVAGQSARVIVANPYGITCNGCGFINAPRVTLTTGKPVLDGAGRLDRFQVDQGSVA IEGTGLNATNVDRFEIITRSAKINAELQAQNLTIVAGRNDVNAQTLNATARADDGSAKPQLAIDSSALGGMYAGAIKLVGTEAGVGVKLAGNLAASGGDI QIDANGQLTLAQTSAATAVNIKANSLTAQGPVYAGTALSVQTQGDLSSQQNLAARDSISLSAGGTLSNNGIIEAGVNADNSRNSAGDVNLSAQNLNNSGK SVIASRNLTATVAQTLNNQGGTLSAQQSTRLTATTLDNQNKGSVLGNSTVQLNVSKVINTQGVISSNGNLGADLGDLNNHDGEISSAGTTRIDAITLDNS GGQVTGDVALNIGLIGALNNRNGVLGSGVNVSITAASLDNSHEGSLVSDGSLTARITGLFDNQNGELSAKGAVDVQSGSLDNRGGSVVGKDRLTLRSNSV DNRGGKIRATKDLQLNVGALDNRDKGLLDGQAAVNYSGTQLDNRGGLLSAAGPMILGVTRIDNSAGRISSKADLNANVTQLVNQGGELVAQGSLLLSGQS LDNRKAGLVGTTKALKLTVGEIDNRGGEISSTVDVTVIGQRLNNSDSGKVLAGTTLGLTVARVINQTLGQLFSVGTSTLIGQSLDNSGGSFVTRQGNLDI RLDNALSNIEGLISSEGTLTVHAGSLDNTRGHLTSAGALALTSTGSLNNQTGSIATDSGLILASKSLDNSQGGLISGKKATALTTGVFNNASGGSLVSGD TLTLNAGAVSNGIGSRIASERALTATVTGFDQQGGQLFSKTSLSLDLNHGQLNNRNGLINAPLLVLKNLQDVDNQGGEISSAQAFTLTAQNLDNSNNGKL ISNQGLTLRIEQLLASVKGLISAQSVDVKSARLDNSGGLITSRGTLGVTVDGQLVNQGGTLIADDELNLKADSVDNSEGHIAGKADVIANVATLDNRHGE LVATDGLKLTGNSLDNRNGGLVGANQALQLMVDAIDNRGGELSSQADVTLVGSRLDNSDGGKLIAQGALSLTVDEVLNRAKGLISGKTDLTLTGRSLDST AGALLSQSNLKLDLSGDLNNSQGLISAEGSLGVTAASLTNNLGSLSVAGPLTLTTSGVVLNRGGQIVTDASLNLTSASLDNSDNGSISGKGPVVVHTATL DNSHNGRLNSGDTLELKATQVTNQDGGRIASVAALTANVTGLDQQGGQLFSNTSLDLDLNHGQLNNQSGFISAPLLMLKNLQDVNNTGGEISSAQTFTVT ARSLDNSNGKLLSNQAVTLRIDQALTNIKGLIAAAALDIKAASLDNSGGTLTSRSSLDLNLDGLLTNQNLGLINATTGLTINSNGLNNQNGSLLGSAIAI DFGAATADLNNDGGLITTEGQLSIQHLRDLTNRSGKIASSQSIDLVARSLDSSNGKLVSNNLLNLNTGALVNQNGVISGVQGLTVNAASLDNRNKGTLSA SDGNLSVTLSGDLLNSGAGALVTQKNLSVTAANLDNSNNGVVSSTGAQTLTINGLLNNATGGLISTDASLAMQAMTLGNAGGTVNATQDLSFTGTALDNT GGSLAGNAAVTLDLLGALTNTNGKLASGGTLLLQRATQINNQGGQLASQSLMTLLSGGLDNRNRGTVAASGLLTITTPGAIQNSADGLIYSQNSDLRIQA ASLANAKGTLQAKGAVTVVSNGDIDNQSGRILATNGDLSIDAGNLDSRGGVLASLQAAFTARLTGVLKNGYDLNNNRQGGVIQGQRLNLNAAMGLDNYGG RISAQSGDAIVVTGNFDNRNGGLYAKGKINVTGNNFDNSGDNDGQIAGQQIDLNLTGELNNRLGIIESDSTLAIKAASLDNQTGQLRALGTSGKTSFQIG GLFDNRNGTLETANTDLTLDAGSFLNTGGSLLHVGTGTFDISTNNVINAGGTLVTRGGLTISTDTWTNSSSIQAGRLTVNVNHLTQTASGQLLASDSFTG TGINWFNEGLLASDGSMNVGLGAAYWGAGRLTSQGDLTLNAAQVSLNSVNSSIAGGGQTTLNVSGQLDNAGRLTSGAGMTINAGGVRNYGTTAAGTDLTL TTGNLVNASGLFFSGKDMSLRVADLNNSYGNIYSLGNLTIDRDGRGGLANSIVNRSASLQSDGSMTLAASSIQNIRDVLTVNNAGIYTARIGEVTCIEGV NAGDCSGKQNHAWEIVQREKLEVTSASAASSITAGGNLTLNGGDLLNQSSTIATAGNFIANVANLTNSGVETGETETTRIYMSQRTSNAGGWYSAASAFT NQYWYESSGYNVNNLGGLQGGIANFIGMTERELPELGSTRKIASSDQSYAAVIQAAGTVNITAQNNIDNSVVRPGYTYIGSGPRTGTGAGGSQFSTRVTV NQQLPPNLAQQQVNPVVLPGFALPTGQNGLFRLSGQESTAPVATGPQSWTMGGASVNLSQRDQTLPGVQTRNILLTNNASAAASSVNLSTADHQAQQPGV GTSAIDVSTPATDVSGATLPGRSTAFTINRVQGVPTSAGTSNPQKYLVETNPVLTDLKQFMSSDYLLSKLGYDPDQSAKRLGDGFYEQTLVQQAVVARTG QRFIDGQTSNDGLFKYLMDNALTSKNELNLAVGVSLTSEQVAALTHDIVWMENAEVNGEQVLVPVLYLANANNRLAPNGALIQGSDVTLIAGKDLNNVGT LKANNNLSATATNDLVNSGLIDAGNRLELLAGNNLINKSGGVIAGKEVSLTTTRGDLINERTVTTHESDSGYRSERSDFVDSAARIEAANNLTIKAGQDF NNTGGVLKSGLDTTINAGRDVNLVSAEQVSGGQRGLHTDQTITQYGSAIDAGQSLIVNAGRDITAIASQIGAKRDVDMSAVGDLTLASAADEEHSYSKTK KVTSQEDHVSQVSTTLTAGGTVLLNAGKDLSLIASRVSAGDEAYLTAGANLALQSAEDTDYSFYSKTKKTSSGKKSRLDEESSTTNIASSVTSGGNATLV ANNDMLIKGSEVASDKGGVKLVAGNDMQIVAVTDSQSVRHESSSSKSGWGGLKSSKVKDQVSETQTTAVGSMISGNTVDVVAGRDATITGSALVSTHDLS VQAGRDLTINAAENTFTRNELHKEKNRDLTGVLTANNLGVDDITGNQHLSVSSQNHTGQSSQTTLTGSTIGSSAGNVTLSSGRELSVIASDLVSTKNMSL TGSKVTIAAGMESSSQSSTDKSSSLGVGRVIGGMIVDTVNTIHNSVEAAKSADDPRLKAVKYAQAAMALNDLGGMGGSAEGAGSDYGKKQGSASNGSLIK IGTELANTHSKSTSEYNSQTAKQSTINAGQNLLIIADGGAPGTAGDIHIVGSSLKAADTALIAKNNIVLESAQNTADWANNGSNNKTAIGASFNLGEQNG FTLDLGASVAKNTGTGSSVTQVNTTLDTGSLSLHSGNDTTLAGAQVRADSIKAVIDGNLNIISRQDTETQSSKQGSAGIGASICIPPFCYGATVTGSASL AAGNMNSDYKAVIDQSGLFAGQGGYDITVGKNTTLQGAVIASEATPEKNLLSTDRLFVSDIKNTSDISAQSAGISLSYGGKSGTSVGGSIPLALEDSDQS KTRSAVSEGTIIVRNAAGVNDLVGLNRDTAHANEALDKPDQKAIQERIDLIQSTVSLSRNIIGKVASAQQQAAADKLKAATTDEERKAALDEYTSWGVGG DKRIMADVAAGLIAVGLGGVGGTTAIGVVANTSANDAFKKIGDYASQQERDATDPVTRAAWAEGGAARVMLHSLVGAVMGLSGSSVAAGALGAGVSAALM PMIAKALKDSDLSAKQQDSLATLIASGLGAAAGSGGGATGATTAVTSATGVEMFNRQLHKQQEIPLLKKKAEELQARGGSRSGAQWE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|