Strain | Pseudomonas sp. RIT288 contigs14, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCACCAGGCTCAGGCCTTTGATCTGCTGCCAGCTCGGCCACTTCTCGCGTCGCCAGAGCAACAGCGCCGCCGCAGGAATCGCCGCGAACAGCGCACGGCC GAGGCCGTTGAGCAGCGGATGCAGTTCCTGCACCACAATCCGGGTGAAGGGCAGGGTGAGGCTGAAAATCACAACCCCGAGCAGACCGAGGGCCATGCCG GTGTTTTCGCGCGAGGACATAGGAAGACCGAAATTGAAGGTGGCAGAGAACGACCTTCATCAAGCCATAAACCGTGGACTTCTGGCTGTTACAGCTAGGC ACAGACTTAGGCGTACAGTTTGCGGACGCTATCGCGAGCAGGCTCACTCCTACAATTGGAATGCATTCCCCTGTAGGAGTGAGCCTGCTCGCGAAGAACG ATAACGCGGTCTTCGAGGTAGTAGCCGGTTGTTACCTGCCCCAACGGATAAGGTCTACCTTGAATACTCCTGCAAGCCCATTCCCAGAGGAGTCCTGTCC
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DNA Sequence for Gene |
>BW33_RS07255
ATGGCTGCGAAAAAAATCCTGATGCTGGTCGGCGATTATGTCGAAGACTACGAAGTGATGGTGCCGTTCCAGGCCCTGCAAATGGTTGGTCACACCGTGC ACGCCGTGTGCCCGGACAAGGCGGCGGGCAAGACCGTGCGCACCGCGATCCATGACTTCGAAGGCGACCAGACTTACAGCGAGAAACCCGGTCACCTGTT CGCCCTCAACTTTGATTTCGCCAAAGTCGCCGAGGCCGATTACGACGCGCTGTTGATCCCCGGAGGTCGTGCGCCGGAATACCTGCGCCTGAACGAAAAA ATCCTGGAACTGGTGCGCGCTTTCGACAAGGCTGGAAAGCCGATCGCTGCGGTTTGCCACGGCGCGCAGCTGTTGGCGGCAGCGGGCGTTCTCGAAGGGC GCGAATGCAGCGCCTATCCGGCCTGCGCCCCGGAAGTGCGGCTGGCCGGTGGCACGTTCATCGATATCCCGGTGACCGACGGCCACGTTCAGGGCAATCT GGCAACTGCGCCAGCCTGGCCGGCGCACCCGAACTGGCTGGCCGGTTTCCTCGGCCTGCTTGGCACCAAGATCACCCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGAGGATTCGCCGATGTGCGAGCTCTACGTCAAGGCCGACCCGATTCTCTACGAATCCCGCTCGCGCTCGCTGCGCATCTGCGGCGTGGTGACGACGCTG CGCCTGGAAAACCAGTTCTGGGACATCCTCAGCGAAATCGCCGAAGTCGATGGCATGACCACCAATCAACTGATCGCCAAGCTGTATGAAGAGGTAATGG ATTATCGCGGGGAGGTGGTGAATTTTGCCTCGTTTTTGCGGGTGAGTTGCACGCGGTATTTGAGTCAGCGGCGGGTGGCGGAGCCGCAGTTGTCGGTGGT GCGGGCGGTGGTGAAATAGCCAACACCGGGGTGACGCCTTCGCGAGCAGGCTCGCTCCCACAGTAGATCTCCAGTGAACACAAAACCTGTGAACACCCGG TATCTACTGTAGGAGCCAGCCTGCTGGCGATGGGGCCGGTACAGGCGACAGAAGTCTTGGGCTGGTCTTTACTCTGAAGCGCGAAACCTCTCAACCGCCA
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Amino Acid Sequence |
>glutamine amidotransferase
MAAKKILMLVGDYVEDYEVMVPFQALQMVGHTVHAVCPDKAAGKTVRTAIHDFEGDQTYSEKPGHLFALNFDFAKVAEADYDALLIPGGRAPEYLRLNEK ILELVRAFDKAGKPIAAVCHGAQLLAAAGVLEGRECSAYPACAPEVRLAGGTFIDIPVTDGHVQGNLATAPAWPAHPNWLAGFLGLLGTKITL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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