Pseudomonas sp. RIT288, BW33_RS03860

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT288 contigs10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGCGAACTGCAACCGCGCACGCACCTCGCCGTGCTGGAAGGCGCGGTCAAAGTCGAGCTCGCGGACAATCGCCAGACCACGCCGCTGATCGTCAACGCC GGTCAACGCACCGACTTCTCGTCCCACACCTTTGGCCAGCTCAGCGTTGCCGATCGCTATGTCGGCGCCTGGAGTCAAGGCATGCTGATGGCCGACAAGA TGCGCCTGGCCGATTTCGTCAACGAGCTGACGCGCTATCGCCGCGGTTTCGTGCGCCTCGATCCGGCAATTGCCGATCTGCGCATTTCCGGCGCCTACCC GATCAGCGACAGTCAACGCACCTTGAACATGCTGGCGCAAACCTACCCGATCCTCGTCAGCGGCCATTTGAATGGCTACTGGATCATGCTCTCCCCGGCC TGAGTGAAAAAATAACTGCCGCTGCGGTGATACTTTTTTCGATCTCGACTGGCTATTGGAGAGAAGCACCTTTTCGTCCTGTTTATAGGCTCATTCATCC
DNA Sequence for Gene
>BW33_RS03860
ATGCTTGCCGCACGCCACCTGCGCCCGGATCGTCACTTCAAACCAGTTGTTCGCAGTGCGTTGCTAAGCCTTGTCATGATCGGTGTGGTTTGCCCGTTTG CCTTGGCTGGCGAGCCTGTGCAGCTGGACTCTGTTGCTGTGCGTGCCTACAACATTCCTGCCGGGCCGCTGGGTGCGACCCTGTCGAGTTTTGCCGTGGA AGCCGGTATCGCGCTGTCATTCGAGCCCGCGCAGGCCGAGGGCCTGAACAGCCCTGCGCTGAACGGCAAATACTCGACTCGAGAAGCGGTCAATCGCTTG CTGGCCGGCAGTGGCCTGGACATGGTGTTGCGCAGCGACGGCAGCTACACATTGGTGCAGCGCCGGGTGACGCTGGATGAAACATCGATCATCGGCACCG AAAAGCGTGCCGACTCCCTGCCAGAAGTGTATGCAGGTGGACAAGTGGCCAACGGCGGGCGCCTGGGCATTCTTGGCAATACGGATGTCATGGACGCCCC CTTCAGCGTCAGCACCTACACCTCGGCGCTGATCAAGGATCAACAGGCCGTCACCGTGGGTGATGTGCTGGAACGTGATTCTTCGGTGCGCTCCACTGGC CAGACCGGCGGGATTGTCGACTCGTTCTTCATCCGAGGCTTTCCCGTCGGCGAAGGCAACCTCGGTGAACTGGCTTTCGATGGCGTGTACGGCGTGGCAC CCAATTACCGGGTGTTCACCGAATATGCCGAGCGCATCGAACTGGTCAAAGGCCCCGGCGCCCTGCTCTACGGCATGTCACCCAACAACGCGGTGGGCGG CGTGATCAACGTGGTGCCGAAACGCTCCCTCGATGAAGACCTGACCCGTTTCACCGCCAGTTACGCCATGGATTCTCAGGCCGGTGGCCATCTCGATGTC AGTCGCCGCTTCGGTGAAGAGCGCCGTTTTGGCGTGCGCTTCAACGGCAGGACGCAACTGGGCAACACGGCGATCGACGATCAATCGCGCCACGTCGACA TCGGCGCGATCTCCCTCGACTATCAGGGCGAACGCCTGCGCACGACCTTCGACTGGCTCAACCAGAAAGAACGCTTCGACGCGGCTTCGCGGCCGTTCCT GATTGCGCCGGGCGTGGACATTCCTTCCGCCGCCAACGGCCGCAGCAACGTCAGTCAGGATTGGGGCTGGTCGAAAACCCGTGACAAATCGGCGCTGCTC AGCGGCGAATATGACCTCAGCGACGCATTGACGGTGTTCGCCCATGCCGGCGGCGGCAAATCGGATGTGGCGCGGATGTCCGACCAGACGCCGACCATTA TCAATGCCGCTGGCGACACCTCGTCGATCCCCGGCTATTACAAGTTCGAAGTAGAGCGTTACACCGTTGATACCGGTGCGCGGCTGCGCTTCGATACCGG GCCGATCAGTCACCGCACCACCGTGCAAATCAGTCGCTATCGCGATGTGTTGTCGCGCGGGATCATTTCCGATGCACCGATCCTGTCGAACATTTACCAC CCGGTGGATCGCCCGCAACCTTACATCCCCAAGCCGGATACGCCGAAGGTCTCGGAGAGCGAACTGAATGGCGTGGCGCTTGCCGACACGCTGTCGATTC TCGATGACCGCGCGCAGGTAACCCTGGGTTTGCGCAAACAGAACATCAAATCCGACAACTACAACGCCGCCGGCGTGGTGACCACGTCCTATGACGACGG CCGGACGACCCCGTTGTTCGGCGCTGTGATCAAGCCTTGGGATCACGTTTCGTTCTACTACAACTACCTCGAAGGGCTGAGCAAGGGCGACATCGCGCCT TCCACCGCGTCCAACGCTGGCGAGATCTTTGCCCCTTATGCTTCCCGCCAGCACGAACTCGGGGTCAAAGCCGACTACGGCACGTTCACCTCCACCATCA GCCTGTTTCAGATCACCAAGCCCAGTGGCGAACTGGCCTCCGGGGTGTTCTCGGTGCAGGGCGAACAACGCAATCGCGGGCTGGAGCTGAACGTGTTCGG CGAAGTCACACCGGGCACTCGCCTGCTCGGCGGCGTGACCCTGCTCAATGCCGAACTGACGAAAACCGGCGTGGCCGCCAACCGAGGCAACAAACCGGTC GGCGTGCCCGAGGTTCAAGCCAACTTCTGGGCCGAATGGGACACCTCATGGGTCGAGGGTCTGACGCTGACCGCAGGCGCGATCCACACCGGCAGCCAGT ACGTGAACCAGGCCAACACACAAAAACTCGATGACTGGACCCGCTTCGATGTCGGCGCCCGCTACAGCACGCGCATCGATGATCGACCGACCACGTTTCG CGCCACCGTGCAGAACGTGTTCGACCACGAGTATTGGTCGGGCGTCGCTTCCTACGGCGCGTTCTCCCAAGGCTCACCGCGCACCTTATTACTGTCGGCG ACTGTCGATTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACGTTCAGCCGGACAGCGGTGTGAGCCGTTGGCCGAACTGACCTTTGCAAAGGCTTTGACCATGGTGATTTTCGATCGACGCAGCCTCGCGTTGGCTGC GCTGTTACTGGCAGGACTGCTGAGCCTGTCTGCGCTGGCGCCGCGCAATGCAAATGCCACCGAAGCGGATACGGTGCGCACCGAAGTGACCGATCTGCTC GGGCGCAAGGTCAAGGTGCATCTGCCGGTCAGACGGGTCATCCTCGGTGAAGGCCGACAGTTGTATCTGGTCGCCGCGCTGGACACACAGAACCCGATCG AACGCATCGTCGGCTGGCGCAAGGACCTGATCCAGTCGGACCCGGACACGTACAACGCCTACCTGCGCAAATTCCCCGGCATTGCCAAGATCCCCACCTT CGGCGGATTTGAAGACGGCACCTTTGATATCGAACAAGCGATCTCGCAGCGCCCGGACGTGATCATCCTCAATATCGAAGCGCAGCACGCCACCGAAGAT
Amino Acid Sequence
>energy transducer TonB
MLAARHLRPDRHFKPVVRSALLSLVMIGVVCPFALAGEPVQLDSVAVRAYNIPAGPLGATLSSFAVEAGIALSFEPAQAEGLNSPALNGKYSTREAVNRL LAGSGLDMVLRSDGSYTLVQRRVTLDETSIIGTEKRADSLPEVYAGGQVANGGRLGILGNTDVMDAPFSVSTYTSALIKDQQAVTVGDVLERDSSVRSTG QTGGIVDSFFIRGFPVGEGNLGELAFDGVYGVAPNYRVFTEYAERIELVKGPGALLYGMSPNNAVGGVINVVPKRSLDEDLTRFTASYAMDSQAGGHLDV SRRFGEERRFGVRFNGRTQLGNTAIDDQSRHVDIGAISLDYQGERLRTTFDWLNQKERFDAASRPFLIAPGVDIPSAANGRSNVSQDWGWSKTRDKSALL SGEYDLSDALTVFAHAGGGKSDVARMSDQTPTIINAAGDTSSIPGYYKFEVERYTVDTGARLRFDTGPISHRTTVQISRYRDVLSRGIISDAPILSNIYH PVDRPQPYIPKPDTPKVSESELNGVALADTLSILDDRAQVTLGLRKQNIKSDNYNAAGVVTTSYDDGRTTPLFGAVIKPWDHVSFYYNYLEGLSKGDIAP STASNAGEIFAPYASRQHELGVKADYGTFTSTISLFQITKPSGELASGVFSVQGEQRNRGLELNVFGEVTPGTRLLGGVTLLNAELTKTGVAANRGNKPV GVPEVQANFWAEWDTSWVEGLTLTAGAIHTGSQYVNQANTQKLDDWTRFDVGARYSTRIDDRPTTFRATVQNVFDHEYWSGVASYGAFSQGSPRTLLLSA TVDF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site