Pseudomonas sp. RIT288, BW33_RS03130

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT288 contigs1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAGCAACTTCCCCAGGCGCAACCGGATCATCAGCGGTTTGTCCCTCGGTGTGCTGGTGGTCGAGGCGAGTGTCGCCAGCGGTTCGCTGATCACCGCCCGG CTGGCAGCGGAACAGGGCCGTGAGGTGTATGCGATCCCCGGCTCGATCCATCACCCCGGCGCACGCGGCTGCCATCAGTTGATCCGCGACGGTGCGGTGC TGGTGGAAACCATCGAACACATTCTTGAAGCCCTGCGCGGCTGGCAGCATTTGCCGTTAGCCACAGACACGCCGGATGCCGGGCATCCCTTGCTTGATCT GTTGCATGCTGCACCGCACACCAGCGAAGCCTTGGTCGACAGCAGCGGCTGGGCGTTGCCCAAAGTCCTCGCGGCGCTCACCGAGCTGGAAATGGACGGC CGCGCAGTGTGTGAAAACGGTCGCTGGCTGGCGAGGACACGCTAGGTTTTACAGGGAAGATCGGTAAACTGCGCAAAACCTGTTTTCGGAGAGTTTTTTC
DNA Sequence for Gene
>BW33_RS03130
ATGGTCAACAGTTGGCGTGTGCAACAAGCCGCACGAGAGATTCGCGCCGGGGCGGTGATTGCCTATCCAACCGAAGCCGTCTGGGGGCTGGGTTGCGACC CGTGGAACGAAGAGGCAGTGGATCGGCTGCTGGCGATCAAGAACCGTTCGGTGGACAAGGGCCTGATCCTGGTCGCCGACAACATCCGCCAGTTCGACTT CCTGTTCGAAGACTTCCCGCAAGAGTGGATCGACCGCATGGCCAGCACCTGGCCGGGGCCGAACACATGGCTGGTGCCGCATCAGAACCTGTTGCCGGAG TGGGTGACGGGCGTGCATGACACGGTGGCGCTGCGGGTCAGCGATCACCCGCAGGTGCGGGATCTGTGCTCGATGGTCGGACCTCTGATCTCGACCTCGG CCAACCCGCAAGGGCGTCCGGCGGCGCGCACGCGGTTGCGCGTCGAGCAGTATTTCCGTGGGCAGATCGACCTGATCCTTGGCGGGCAACTGGGTGGTCG CAAGAACCCCAGCGTGATCCGTGATCTGGCGACCGGCAAGGTCATTCGCCCCGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCTGCGTCGAAAACCTTTACCGTGAGTCTTCCTCGCCTTGATGGCGAGGAAGACTACGCGTGCCTGCGATTTATCCTGCAATGACGCCAATATCTGTGT CGGAAAAGTCGTCAAGTCCCCGGATTCATTGGCTTTTCCCACTTGATTATCAGACTTTCTGGCGTGGCGGAATCGGCAAAAGCAACCATCCTTTCCTTGC ACTCGAAACACTTCGATAAGTTAAGGTCTGCGGAGAAAGAATGGACACTACTAATTTGCAACTCACGGATTACCTGCAGGCGCTTCAGGTGACGTTAAAG AGTCACCTTGAGGGTTGTCGCATCGTGATGCTTGAAGCAGGGGCGGATACTCAGGAGTTCGACCGGTTTGTCGATCGGCAATTTCGGCTTCGGCTGCAGC ATTACATGCTGACTTCACGGGCGCGGATGCTCGAAACCAAGCTGGCGATAAATTCGCGCAGTACGCACTTTCTGCTGTACCGGCACGATCAACTGTTGGC
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MVNSWRVQQAAREIRAGAVIAYPTEAVWGLGCDPWNEEAVDRLLAIKNRSVDKGLILVADNIRQFDFLFEDFPQEWIDRMASTWPGPNTWLVPHQNLLPE WVTGVHDTVALRVSDHPQVRDLCSMVGPLISTSANPQGRPAARTRLRVEQYFRGQIDLILGGQLGGRKNPSVIRDLATGKVIRPD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site