Strain | Pseudomonas sp. RIT288 contigs1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTGAGCCAGACTTCCCAGCCCAGACCCCAGGCGCCGAGGGTCGGCGATTCCCAGTTGTCTTCGACGAAGCGGATGTCGTGGACCAGCGGGTCCAGGCCGA CATGCTTGAGCGAGCCCAGGTACAGTTCCTGGAAGTTGTCCGGGTTCGGCTTCAGGACGACCTGGAACTGATAGTAGTGCTGCAGACGGTTCGGGTTTTC CCCGTAGCGGCCATCAGTCGGACGGCGGCTTGGCTGCACGTAGGCGGCGTTCCAGGTTTCCGGGCCGATGGCGCGCAGGAAGGTCGCGGTGTGGAAAGTG CCGGCGCCTACTTCCATATCGTAGGGCTGAAGTACCACACAACCTTGCTCGGCCCAGTATTGCTGGAGCGCGAGGATCAAGTCTTGGAAGGTACGCACGG CTGGCGTAGGCTGGCTCACGAAATTCACCTGTTTCTTGGGCTGCGATTTAAAGAGCGGGAGTATACCCGATTCAGTCGCACCTCCACCCCCTGGAGCCTT
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DNA Sequence for Gene |
>BW33_RS03080
ATGCCACGCTGCTTTTGGTGTACCGAAGATCCGTTGTACATGGCTTATCACGATCAGGAGTGGGGCACGCCGCTACGCGATGCGCAGGGTTTGTTCGAGT TGCTTTTGCTCGAAGGGTTCCAGGCCGGGCTGTCGTGGATCACCGTGCTGCGCAAACGCGAGCGCTACCGCGAGGTGTTGTACGGCTTCGACGTGCAGCG TGTGGCGCAGATGAGCGACGCGGAAATCGCCGAATTGATGCTTGATCCGGGGATCATCCGCAACCGCCTCAAACTCAATGCCGCGCGGCGCAACGCCCAG GCCTGGCTGGCGCTGGAAGACCCGGTGGCGTTTCTCTGGTCGTTCGTCGGCGGCCAACCGATCATCAATCATTTCAAGGATCGCAGCGAAGTCCCGGCGA TCACCCCCGAAGCCGTGGCGATGAGCAAAGCCCTGAAAAAGGCTGGCTTCACCTTCGTTGGCCCAACCATTTGCTACGCACTGATGCAGGCCTCGGGCAT GGTCATGGATCACACTCAGGACTGCGACCGCTACGCGCTGCTGGTCAACGGCGGTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AATGGCCGCCTCGCGCACAGCACAAAATCAGGAGTGACCTGTGGAAAAGTTTAAAGGCGCCTTGCTGGTAGGCGCTCTGCGGCTGTTTGCCCTGCTGCCA TGGCGGGCCGTGCAGGCCGTGGGTTCGGCGATCGGCTGGATCATGTGGAAAACCCCCAACCGCTCCCGCGACGTGGTGCGGATCAACCTTTCCAAATGTT TTCCACAGATGGACCCGGCCGAACGTGAGCGCCTGGTCGGTCAGAGCCTGAAAGACATCGGCAAATCCCTGACCGAAAGCGCCTGCGCCTGGATCTGGCC GGCGCAGCGTTCGATCGATCTGGTGCGCGAAGTCGAAGGCCTCGACATCCTCAAGGATGCGCTGGCCTCGGGCAAGGGTGTGGTCGGCATCACCAGCCAC CTGGGCAACTGGGAAGTGCTCAACCACTTCTATTGCAGCCAGTGCAAACCGATCATTTTCTACCGCCCGCCAAAGCTCAAGGCGGTGGATGAATTGCTGC
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Amino Acid Sequence |
>3-methyladenine DNA glycosylase
MPRCFWCTEDPLYMAYHDQEWGTPLRDAQGLFELLLLEGFQAGLSWITVLRKRERYREVLYGFDVQRVAQMSDAEIAELMLDPGIIRNRLKLNAARRNAQ AWLALEDPVAFLWSFVGGQPIINHFKDRSEVPAITPEAVAMSKALKKAGFTFVGPTICYALMQASGMVMDHTQDCDRYALLVNGG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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