Pseudomonas sp. RIT288, BW33_RS02410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT288 contigs1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCCACCCGGGCGTGGATCGCCGGCAATGTCATGCCGCACCTGCAGAGCGCCAGCGCGCCGCGCAAGGTCGAAACCGACGACGTCGAAACCCAGCCCGCCT GGGAAAAGGCCCTGCAGGAAGTGCTGCCGCTGTTACGCAAGGAAGGCCTCAAGCCTGCCGTGCAGACGCTCAAGCAAGGGCTGCAATCGGCTCACGGCGG ACGCGAGCGGTTCTTCTGGCAGTTCGCCCTTGCCCGGCTGTGCTTCATGGCCAAGAAGTACGAACTGGCCAAGAACCAGCTAGAAACTCTCGATCAGACA TTACAGGACTCAGGCCTGCACGCCTGGGAGCCCGATCTTGCATTGGAAGTGCTGCACCTGCTGCACAGTTGCTGCGAGTTGTTGCCGCAGAACCATGCCG TACGTGAACGCAAGGAAGAGATTTATCGCAGGCTGTGCCACCTCGATCTCGAAGTGGTACTCGAATAGGCCCCAGGGCCACAACCGCAAGGAGAAAAGCC
DNA Sequence for Gene
>BW33_RS02410
ATGGCCAAAGAAGGCTCGGTAGCCCCCAAGGAACGCATCAACGTCACCTTCAAACCCGCCACCGGCGGTGCTCAGGAAGAGATTGAACTGCCGCTGAAGC TGCTGGCAATCGGTGACTACACCCACCGCAAGGACGATCGCAAAATCGAAGATCGCAAGCCGATCAGCATCGACAAGATGACCTTCGACGAAGTGTTGGC CAAGCAAGAGCTGGGTCTGACGCTGAGCGTGCCGAACCGTCTGCAGGAAGATGGCGAGGCCGACGAGCTGGCTGTGCAATTGCGCGTCAATTCGATGAAG GACTTCAACCCGGCCAGCCTGGTCGAGCAAGTGCCTGAGCTGAAAAAACTGATGGAACTGCGCGATGCGCTGGTGGCCCTCAAAGGCCCGCTGGGTAACG CACCTGCGTTCCGTAAAGCGATCGAAGGCGTGCTCGCCGACGACGAATCCCGCGGTCGCGTACTCGGTGAGCTGGGCCTGAACGCCGCAGCCCCGGACGC CTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GACTCCAGCCAAGGAAGCCAACACAATGAGCACTAGCGCAGCACAAGAGAAGAGCGCCGAAAGCGGCGAGTACAGCATTCTCGACAGCATCATCGCCGAA ACCCGTCTGACTCCGGACGACGAAGCCTACGACATTGCCAAGCGTGGCGTGTCGGCGTTCATCGAAGAACTGCTCAAGCCGCAGAACAACGGTGAGCCGG TCAAGAAGGCCATGGTTGACCGCATGATCGCCGAGATCGATGCCAAGCTCAGCCGTCAGATGGACGAGATCCTGCACCACCCGGACTTCCAGGCGCTGGA ATCGTCGTGGCGTGGCCTGCAGTTGCTGGTCGACCGCACCAACTTCCGCGAAAACATCAAGATCGAAATCCTCAACGTCTCCAAAGAAGACCTGCTGGAC GATTTCGAGGACTCGCCGGAAGTCATGCAGTCGGGCCTGTACAAGCACATCTACACCGCTGAATACGGCCAGTTCGGTGGTCAGCCGGTTGGCGCGATCA
Amino Acid Sequence
>hypothetical protein
MAKEGSVAPKERINVTFKPATGGAQEEIELPLKLLAIGDYTHRKDDRKIEDRKPISIDKMTFDEVLAKQELGLTLSVPNRLQEDGEADELAVQLRVNSMK DFNPASLVEQVPELKKLMELRDALVALKGPLGNAPAFRKAIEGVLADDESRGRVLGELGLNAAAPDA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site