Pseudomonas sp. RIT288, BW33_RS02185

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. RIT288 contigs1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CATCACCCGCATGCGTGCCTAATTCACACCTAACAAGGAGTCATACATGACCAAGACTGTTATCACCAGCGACAAGGCCCCAGCCGCCATTGGTACCTAC TCCCAGGCGATCAAGGCCGGCAACACTGTCTACATGTCGGGCCAGATTCCTCTGGACCCAAAAACCATGGAACTGGTTGAAGGCTTCGAAGCCCAGACCG TCCAGGTGTTCGAGAACCTCAAAGCCGTGGCTGAAGCCGCTGGCGGTTCGTTCAAGGACATCGTCAAGCTGAACATCTTCCTCACTGACCTGAGCCACTT CGCCAAGGTCAACGAGATCATGGGCAAGTACTTCGATCAGCCGTACCCAGCGCGCGCCGCCATCGGCGTTGCTGCCCTGCCGAAGGGTTCGCAGGTCGAA ATGGATGCCATCCTGGTCATCGAGTAATGCACACGGCGCAGCCTTCAAACGCTGCGCCGACTGCTCTGCGGTAAAGAAAAGGTTTTGAAAGGATTCCACC
DNA Sequence for Gene
>BW33_RS02185
ATGCGCAAAGCGCTTGCTCTCTCGCTGCTCGCCATTTTCCTCGGCGGCTGTGCCAGCGACCCCGCCGACCGTGACATCAGCGGCACCTGGATCAACCAGG TGGCGATCGACGCTGCTGCCAAGGGCGGCCCCCTGCGCGAAGCGCTTCAGGCCTATGGCCCGAACCTGGAGTGGGACGTCAACACCAAGGCCGGTCAGGC CCGCTACACCAACGGTTTCGAGAATGTCGAAGGACGGCTGCAGGGCGAACAGTCCGGCGCCTGGAAAGTCGACTTCTATGGCAGCTCCGGCAGTGAGCTG AAACGCGACGGTGGCCGGATGAAACAAGCCGCCACCGAGAACGAGCCCGACCAGTTGTTCGACCGCGCGCAAATCCCCGTTCCGGAAGGCGCGCCAATCG GCGCCAGCTTCGAACGGGCGCTGTATTCGGCCTATCTGGGCGGCAGCTGGAAGATTGCCAGCGGCGACGGCGAAGGCAACACCGTGCAGTTCCAGGCCGA TGGCCAGGTATCCGGCCTGCCCGGCGCCGACCGCTATGCCCTGTGCCTGGCAGGCGACTGCGCCTCGATGAACAGCGACCACGACAGCATGTGGCTGCAA CTCAACGGCCAGGGCAACAACTGGATCTTTGCCCGCAAAGGCAAGGCGCTGGAGATCTTCCAGGCAGTGAACAGCGCACTGGCGGATGAAATGCCGCAGT TCACCCCGGGTGAGCGCAAGTGGTTGCTTGAGAAGCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTCCCCGAGACAGCACATAACCCTGTAGGAGTGAGCCTGCTCGCGATGACGGTTTAACAGCCAACATAAGTGTTGAATGTTATTGCCTCATCGCGAGC AGGCTCACTCCTACAGTTGTTTTTGGGCGCCTGGAAGTCAGCACTTGCCTTCTAGAATGGCCGCATAGCCTTCGCGATAACTCGGATACTTCGGCGTCCA GCCCAGCGCCTTCGCCCGGGCATTGCTGCAGCGCTTGCTGCCGGCGCGGCGTACGCTGGCGTCTTCCGCCCAATCGGTGACACCCAGATACTCGCGCAGC CAGGCAACCACTTCGGCCAGCGGTGCCGGCGCATCGTCCACCCCGATATAGATATCCTGTAATGGCTCGCCCCGATGAGCCGCCTGCAGCAGAAACGCCA TCAGCCCCGCCGCGTCATCGGCATGAATGCGATTGCCGTACAGCGGCGGCTCGACCGCCACCCGATAACCGCGACGCACCTGGGTCAGCAGCCACTCACG
Amino Acid Sequence
>hypothetical protein
MRKALALSLLAIFLGGCASDPADRDISGTWINQVAIDAAAKGGPLREALQAYGPNLEWDVNTKAGQARYTNGFENVEGRLQGEQSGAWKVDFYGSSGSEL KRDGGRMKQAATENEPDQLFDRAQIPVPEGAPIGASFERALYSAYLGGSWKIASGDGEGNTVQFQADGQVSGLPGADRYALCLAGDCASMNSDHDSMWLQ LNGQGNNWIFARKGKALEIFQAVNSALADEMPQFTPGERKWLLEKQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site