Pseudomonas sp. RIT288, BW33_RS00175

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006457 protein folding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01183
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0043165 Gram-negative-bacterium-type cell outer membrane assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01183
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01183
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051082 unfolded protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01183
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0030288 outer membrane-bounded periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01183
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0042277 peptide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01183
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0050821 protein stabilization
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01183
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF09312 SurA N-terminal domain IPR015391 SurA N-terminal 30 147 1.6E-42
SUPERFAMILY SSF54534 FKBP-like - - 177 280 3.92E-25
Gene3D G3DSA:3.10.50.40 - IPR046357 Peptidyl-prolyl cis-trans isomerase domain superfamily 285 422 8.2E-39
PANTHER PTHR47637 CHAPERONE SURA - - 6 283 6.2E-120
Pfam PF00639 PPIC-type PPIASE domain IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type 184 275 1.7E-17
Hamap MF_01183 Chaperone SurA [surA]. IPR023034 Peptidyl-prolyl isomerase SurA 13 431 33.162773
Gene3D G3DSA:1.10.4030.10 - - - 26 153 6.7E-39
Pfam PF13616 PPIC-type PPIASE domain - - 280 386 1.6E-29
SUPERFAMILY SSF109998 Triger factor/SurA peptide-binding domain-like IPR027304 Trigger factor/SurA domain superfamily 30 201 1.8E-44
Gene3D G3DSA:3.10.50.40 - IPR046357 Peptidyl-prolyl cis-trans isomerase domain superfamily 171 284 8.6E-25
SUPERFAMILY SSF54534 FKBP-like - - 286 387 1.96E-33

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.