Pseudomonas sp. PTA1, EW80_RS26225
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PTA1 EW80DRAFT_scaffold00017.17, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGAAATTCGCAGTGTCTCGGACACGCCGATCGTGATCCTCACCGCCAAGGAAGACGATCTCGATCACATCCTCGGTCTGGAGTCCGGCGCTGACGATTA CGTGATCAAACCGATCAAGCCGCCGGTACTGCTCGCGCGGCTGCGTGCGCTGCAACGGCGGCAGACGCCGGACAGCAGCGTGGTGAGTTTTCTTGAGTTC GGGCAATTGAGCATCGACCGCAGTTGCCGTGAAGTGCGCTTGGCCGGTGAGCTGATCGAGCTGACCACCATGGAGTTCGAATTGCTCTGGTTGCTCGCCA GCGCGGCAGGCAAGATTCTTTCCCGCGATGACATTCTCAATCGCATGCGCGGCATCGCTTTCGACGGCCTCAACCGCAGCGTCGACGTCTACATCAGCAA ACTGCGCAACAAACTCAAGGACAATCCCCGCGAGCCGGTGTGCATCAAGACCGTGTGGGGCAAGGGCTATCTGTTCAATCCGTTCGCGTGGGAGCTGTAG
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| DNA Sequence for Gene |
>EW80_RS26225
ATGCTGCGTTTGTTCCTCGGGCTGTTTCTGGTGATGACGGTAGGGCTGGTGCTGGCGTTGCAGACGGTCGAGCACACCTTCAACGCCTTGCTCGACAGCC AGACGCAGGATTACAACCGTGAAGCCGTGCGCGGTCAGGCGTGGTCGCTGGTCGATCATCTGCAAGGCCGCGAAGGCGCCGAGCGTGAACAGAAACTCGA TTCATTGCGCGCGCATTACGGTCTGTCGCTGAGCCTGATCGAGGCCGATCAACTGGCCCTCACACCGCAGGAAAAAGCCGAGCTCGCGCGGAACCTGTTG GTGATCCGCGACGATTACACGCAGTTCATCAGCAACATCGATGGCGGCTCGCAGCTGCTCAGCATCAAGCTGCCGCCGGAGCCGAGCCTGATGCCGTTCT ACATCACCGCGGCGTACATGATGCTCGCAGTGCTGATCGGCATCGTCCTGTTTTTCTGGGTGCGCCCGCACTGGCGCGATCTGGAAAAGCTGCGGCTGGC GGCCGAGCGTTTCGGCGACAACGATCTGTCGGTGCGCATCCAGTTGTCGCGGCGCTCGAACATCCGCGACCTGGCCGAGCATTTCAATCTGATGGCGGCG CGCATTGAGGGCTTGATCGCCAATCAGCGCGAGCTGACCAATGCGGTGTCGCACGAATTGCGCACACCGATCGCGCGGCTGTCGTTCGAACTCGATCAGC TCAAACAGCAACCCGACGCGAGCCAGAATCGCGAGCTGATCGCCGACATGTATGCCGACCTTGGTGAGCTGGAGGAGATGGTCTCGGAGCTGCTGACGTA CGCCAGCCTTGAACACGGCGCGACAGTGATCAAACGGGAGAATATTCATGCGGCCGACTGGCTCGACAGCGTTGTCGGCAGTGTGGCGCTTGAGGCCGAA GCAGTGGGCGTGCAGTTGACGATCGCGGGTTGCCAGGTCGACACCGTAAGCATCGAACCGCGTTTCATGGCGCGCGCGGTGATCAACCTTCTGCGCAACG CCATTCGCTATGCCGAGCAGCGCGTTGAGGTGTCGCTGCTGCGCAACGGCAATGACTATGAAGTGCGGGTCAGCGATGACGGGCCGGGTGTGCCGCTGGA GGGACGGGAAAAAATCTTCGAACCGTTTTCCCGACTGGATGCCAGCCGTGATCGGCGCACCGGTGGTTTCGGACTGGGCCTGGCGCTGGTGCGGCGGGTG TCGCAGTCCCATGGCGGGCAGGTTGAGGTTGGCGACTCGGTGTGGGGCGGGGCGTTGTTCAGGATGACCTGGGCGCATCTGGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGATATTGCCTGACCCGGCCCCTTCGCGAGCAGGCTCGCTCCCACAGGTGATCGCAATCCAAATGTGGGAGCGAGCCTGCTCGCGAAGGGCGCGGTGTT CAGCGGGTCACACCCAGTCGCTCATGCCACTGAGCAATAGACTCTTCAGGATATTCATCAAACTGCTGATCCTTCGGCTTGGCCTCCACCTCAACCCACG GCGCTTTCGAGCCAAGCATCAGGTGCGTGTGTTCCGGCGGCACCGGAAGTGGCGTGTCGATCGCCGAGGCGAATGGATGAATCAGCCCCGGCCACTCCGG GCTGAACAGCCACAGGCCGCTGCCGCACAGCGAGCAGAAGTGACGCTCGGCGCTGCTGCGATGGGCGCGTTTATCGCCTTCAGCTTTCATCTTCGCGTGA TAGATGCTGATGTTTTTGCGCCCGCGAACCTTGAGAGTGGTCGCGTCGCCGCCAAGGTTGATCGCATAACCGCCGCCGCCCTGAGTCTTGCGGCAGATCG
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| Amino Acid Sequence |
>ATPase
MLRLFLGLFLVMTVGLVLALQTVEHTFNALLDSQTQDYNREAVRGQAWSLVDHLQGREGAEREQKLDSLRAHYGLSLSLIEADQLALTPQEKAELARNLL VIRDDYTQFISNIDGGSQLLSIKLPPEPSLMPFYITAAYMMLAVLIGIVLFFWVRPHWRDLEKLRLAAERFGDNDLSVRIQLSRRSNIRDLAEHFNLMAA RIEGLIANQRELTNAVSHELRTPIARLSFELDQLKQQPDASQNRELIADMYADLGELEEMVSELLTYASLEHGATVIKRENIHAADWLDSVVGSVALEAE AVGVQLTIAGCQVDTVSIEPRFMARAVINLLRNAIRYAEQRVEVSLLRNGNDYEVRVSDDGPGVPLEGREKIFEPFSRLDASRDRRTGGFGLGLALVRRV SQSHGGQVEVGDSVWGGALFRMTWAHLD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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