Pseudomonas sp. PTA1, EW80_RS16340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PTA1 EW80DRAFT_scaffold00016.16_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGACGCCGTCGAACCAGATCCTCACCGGCATGGCGCTGTTCCTGACGCTGTTCATCATGGCGCCGGTGTTCGACCGGGTGAACAACGACGCGCTGCTAC CGTATCTGGCTGAAACCCTCACCGCCCAGCAAGCGGTGGAAAAGGCCCAGGTGCCGATCAAGGACTTCATGCTCGCGCAGACTCGCACCAGCGATCTGGA GCTGTTCATGCGCTTGTCCAAGCGCACCGACATTGCCAGCCCGGATCAGGCGCCGCTGACCATTCTGGTGCCGGCGTTCGTGACTTCCGAGCTTAAAACC GCCTTCCAGATCGGCTTCATGATCTTCATTCCGTTCCTGATCATCGACCTCGTCGTGGCGAGCGTGCTGATGGCCATGGGTATGATGATGCTCTCGCCGC TGATCATCTCGCTGCCGTTCAAGATCATGCTGTTCGTGCTGGTCGATGGCTGGGCGCTGATCATCGGTACTCTGGCCAGCAGTTTTGGAGGTGTTTCGCC
DNA Sequence for Gene
>EW80_RS16340
ATGACGCCGGAAGTCGCGGTCGATATCTTTCGTGAAGCCCTGTGGCTGACCACCATGATGGTTGCCATCCTGGTGGTGCCGAGCCTTCTGGTCGGCCTGC TGGTGTCGATGTTCCAGGCTGCCACGCAGATCAACGAACAGACCCTGAGCTTCCTGCCGCGTCTTCTGGTGATGCTGGTGACCCTGATCATCGGCGGTCC GTGGATCGTGCAGACGTTCATGGAATACATCATCCAGCTGTACAAAAACATTCCGATGGTCATCGGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCATGCAATCGTTGCTTCAGCTGACCGACACCCAGATCAGCACCTGGGTGGCGTCGTTCATGTTGCCGCTGTTTCGCGTGGCGTCGATGCTGATGGTCA TGCCGGTGTTCGGCACCACCCTGATTCCGCGTCGCGTGCGCCTGTATTTCGCCGTGGCGATCACCGTGGTCATCACCCCGGCGCTGCCGCCGATGCCCGC CGTCAGCCCGCTGGATCTCAGCGGCCTGTTGCTGATCGGCGAGCAGATTCTGGTTGGCGCCGTGCTCGGCTTTTCCCTGCAACTGTTCTTTCAGGCGTTT GCCGTGGCTGGACAGATCGTCGCGATCCAGATGGGTATGGGCTTCGCCTCGATGATCGACCCTACCAACGGCGTTTCGGTGGCGGTGATCGGGCAGTTCT TCACCATGCTGGTGACGTTGCTGTTCCTGTCGATGAACGGCCATCTGGTGGTGTTCGAAGTCCTCACTGAAAGTTTCACCACGCTGCCGGTCGGCGGCGG
Amino Acid Sequence
>flagellar biosynthesis protein FliQ
MTPEVAVDIFREALWLTTMMVAILVVPSLLVGLLVSMFQAATQINEQTLSFLPRLLVMLVTLIIGGPWIVQTFMEYIIQLYKNIPMVIG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site