Pseudomonas sp. PTA1, EW80_RS13895

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PTA1 EW80DRAFT_scaffold00011.11_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CACCGGGCAGCGTTTTCTCGAGATCTGGTCGGGGCTGCCGGTGCTGTATCTGCTGATCATCCTTGCCAGTTTCGTCCAGCCGAATTTCTGGTGGTTGCTG GGCATCATGCTGCTGTTCTCGTGGATGAGCCTGGTCGATGTGGTGCGCGCCGAGTTCCTGCGCGGGCGCAATCTGGAATATGTGCGCGCCGCCCGCGCGC TGGGCATGCAGAACGGCGCGATCATGTTCCGCCACATCCTGCCCAACGCCATGGTCTCGACCATGACCTTCATGCCGTTCATTCTCACCGGCGCCATCGG CACCCTGACCGCGCTGGACTTCCTCGGCTTCGGCTTGCCGGCCGGCAGTCCGTCGCTGGGCGAACTGGTTGCCCAAGGCAAATCCAACCTGCAGGCGCCA TGGCTGGGCATGAGCGCGTTTGCCGTGCTGGCGCTGATGTTGAGTCTGCTGGTGTTTATCGGCGAGTCCGCTCGCGATGCCTTCGACCCGAGGAAGTGAA
DNA Sequence for Gene
>EW80_RS13895
ATGAATCAGGACAATCTGATCGAAGTGCGCGACCTCGCCGTCGAATTCGGTTTCGGCGAGCGCGTGCACCGCGTGGTCGAAGGCGTGAGCTTTGACATCA AGCGCGGCGAGACCCTGGCACTGGTCGGCGAATCGGGCTCGGGCAAATCGGTAACGGCGCATTCGATCCTGCGCCTGCTGCCCTACCCCATGGCGCGGCA TCCGGCCGGCAGCATCAATTACGCCGGGCAGAACCTGCTGGATTTGAGCGAGAAGACCATCCGCCATATTCGTGGCAACCGCATCGCCATGATCTTTCAG GAGCCGATGACCTCGCTCAATCCGCTGCATTCGATCGAGAAGCAGATCAACGAAGTGCTCGGCATCCACAAGGGCCTGAGTGGCAAAGTGGCGACCAAAC GCACGCTGGAGCTGCTGGAAATGGTCGGCATTCCCGAGCCGCACAAGCGGCTCAAGGCGCTGCCCCATGAATTGTCCGGCGGCCAGCGGCAGCGGGTGAT GATCGCCATGGCCCTGGCCAACGAGCCGGAATTGCTGATCGCCGACGAACCGACCACGGCGCTGGACGTGACCGTTCAGCTGAAAATCCTCGATTTGCTC AAGGATCTTCAGGCTCGATTGGGCATGTCGCTGCTACTGATCAGTCACGATTTGAACCTGGTGCGAAGAATTGCGCATCGCGTATGTGTCATGCAGCGCG GTTGCATCGTCGAACAGGCATCGTGCGCAGAGCTGTTCCGTTCGCCGCAGCATCCGTACACTCGGGAATTGCTCGGCGCGGAGCCCAGCGGCGGCCCGGC GAGCAATGAAATCGGCGCGCCGCTGCTCGAAGTCGAGGACCTCAAAGTCTGGTTCCCGATCAAGAAAGGCCTGCTCAAACGCACGGTGGATTACGTCAAG GCAGTGGACGGCATCAATTTCAGCCTGCCTCAGGGGCAGACTCTGGGGATCGTCGGCGAAAGCGGTTCCGGCAAATCCACCCTCGGTCTGGCGATTTTGC GGCTGATCGGCAGCAAAGGCGCGATCCGCTTTGAAGGCAAGCAGCTAGACTGCCTGACGCAGAACGAGATTCGGCCGCTGCGGCGGGAGATGCAGGTGGT GTTTCAGGACCCGTTCGGCAGCCTGAGCCCGCGCATGTGCGTCAACGACATCGTTGGCGAAGGCCTGCGGATACACAGAATGGGCACCGCAGCCGAACAG GAAGCGGCGATCATTGCGGCATTGAAGGAGGTAGGTCTGGATCCGGAAACCCGGCACCGCTACCCCCACGAATTTTCCGGTGGGCAACGGCAGCGAATCG CCATTGCCCGGGCCTTGGTGCTGAAACCGGCGCTGATCCTGCTGGACGAGCCGACTTCGGCGCTCGACCGCACGGTGCAGCGGCAAGTGGTGGAGCTGTT GCGTTCACTGCAAGCCAAGTACAACCTGACGTATTTGTTCATCAGCCATGACCTGGCTGTCGTCAAAGCGCTGAGCCACCAGCTGATGGTGGTCAAGCAT GGCCAAGTGGTCGAACAGGGAGACGCGCAAAGTATTTTTGCCGCCCCCCAACATCCGTATACACAGCAGTTGCTGGAAGCCGCTTTTCTGGCACCAGCCA CTGCGCAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGAAAGAGGAGCAACACATGGGTTTTCTCGCCGGTAAGCGCGTACTGATCGTCGGTGTCGCCAGCAAGCTGTCCATCGCATCCGGCATCGCTGCCGCC ATGCATCGCGAGGGCGCTGAGCTTGCCTTCACTTATCAGAACGACAAACTCAAGGGTCGCGTCGAAGAGTTCGCACAAGGCTGGGGTTCGAGCCCTGAGC TGTGCTTCCCGTGCGACGTGGCCAGCGATGAAGAAATCGCCAAGGTCTTCGAAGAGCTGAGCAAGAAGTGGGACGGTCTGGACTGCATCGTCCACTCCGT CGGCTTCGCCCCGGGCGACCAACTGGACGGCGACTTCACCGAAGCCACCACCCGTGAAGGCTTCCGCATCGCTCACGACATCAGCGCCTACAGCTTCGTG GCCCTGGCCAAGGCCGGTCGCGAAATGATGAAAGGCCGCAACGGCAGCCTGCTGACCCTGTCGTACCTGGGCGCCGAGCGCACCATGCCGAACTACAACG
Amino Acid Sequence
>microcin ABC transporter ATP-binding protein
MNQDNLIEVRDLAVEFGFGERVHRVVEGVSFDIKRGETLALVGESGSGKSVTAHSILRLLPYPMARHPAGSINYAGQNLLDLSEKTIRHIRGNRIAMIFQ EPMTSLNPLHSIEKQINEVLGIHKGLSGKVATKRTLELLEMVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILDLL KDLQARLGMSLLLISHDLNLVRRIAHRVCVMQRGCIVEQASCAELFRSPQHPYTRELLGAEPSGGPASNEIGAPLLEVEDLKVWFPIKKGLLKRTVDYVK AVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLIGSKGAIRFEGKQLDCLTQNEIRPLRREMQVVFQDPFGSLSPRMCVNDIVGEGLRIHRMGTAAEQ EAAIIAALKEVGLDPETRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLFISHDLAVVKALSHQLMVVKH GQVVEQGDAQSIFAAPQHPYTQQLLEAAFLAPATAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site