Pseudomonas sp. PTA1, EW80_RS12775

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PTA1 EW80DRAFT_scaffold00010.10_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATAACTGACTTTGATCTGACCGCTGGCCGCCGCCGGGATTTTCACTTCAAGCCCTTGGCGGTACACCGGCTGCTCGCCGAAGAACTCATCGCTGTGGGAT TCGCCTTCAGGCAACACCGGCTGCTGATCGGCGGCCAGTCCATCGAATTTCAGGCGTTTCTGATACAGGTAGTAGCCGTCGGTGATCTGCCAGAACAGCT GGGTTTCGCCTGAATCCAGACGCTCGGAAGTCAACACGAACGCTTGGTCGACCGGCAAGAAGTCCGGTTTCGTATCGAAAGGATTGTTTCCAGCCTGGGC CAGGCCCGAGATCAGTAACGCAAACAAAACAAAAAAATGACGCATGGAGAAGCCTTGTCCCTGTGCAAGTGAGGTGCACAATGGGCAGCGGCGATTAACC GATGATTAACCGCCATGCCCTTGTCGCAGTGACGTTGGGCGCCATAATGTCAGCTTAATCGGCCAACTGCCTAATCCGCTTTTTTCCTGTGGGATTCACC
DNA Sequence for Gene
>EW80_RS12775
ATGCACGTACTGGTTTGCGAAGACGACGAGCTGATTGCCAGCGGCATCGTTGCCGGGCTCACGGCTCAGGGTCTGACCGTCGAGCACGTCAACACCGCGT CCAAGGCGCGGGCGATGCTCAAGGTCGCCGAATTCGATGTGATGGTGCTCGATCTCGGCCTGCCGGACGAAGATGGCCTCAAGTTGCTGCAACAGTTGCG GCAGAGCGGCCTGGAAATTCCGGTTCTCATCCTAACTGCCCGTGACTCGGTGACCGATCGTGTCGATGGTCTGCAGGCCGGCGCCGACGACTATCTGCTC AAGCCTTTCGACCTGCGCGAACTGTTCGCTCGCCTGCAAACCCTGTTGCGCCGCGTGGCCGGGCGCAGTGTCAATCTGATCGAGCACGGCGCGCTGACCT ACGACCCGAGCAGCCGCGAAACCCGTCTGGCCGGGCAACCGGTGGACCTGTCGCGCCGTGAGCAGTCGCTGTTGCAGGCGCTGCTGCACAATCGCGGCCG GGTGCTGTCCACCGAGCAACTGAAGGACAGCGTCTACGGCTTTAACGACGAACTGGAAAGCAACGCGCTGAACGTGCATATCCATCATCTGCGCAGCAAG CTTGGCAAAGGCATCGTTGAAACCGTGCGCGGTCTGGGCTATCGCCTCGGGCCTGCCGATGGCGCAGAGCAAGGCAAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGAGTCTGCGACTGCGCCTGAGCCTGACGCTTGGCGCGGCGTTCGCGCTGATCTGGGCGCTGGCGGCGGCGTGGATGCTCAGCGACCTGCGCAATCAGAT GATGTTTTCCCTCGACCAGCGTCTGGTGGCCTCGGCGCGCATGGTCGCCGGTTTGCTCGAGCAATTGCCGACGCTGCCGAGCAAGGGCGAGGGCACCCAT TTCAGCGCAGAACAGCTGAATATTCCCGGTGGCATGGCTTGTCAGGTCAGCTCATTGCGCGGCGAGATTCTCGCGCGAAGCCACAACAACCCCGAGCAAG CGCTGGAAGCCGAGAAAATGGGCTTCCACGATCAGATGATCGACGGCGCCCCGTGGCGCAGTTTCACCCTGGCCCGCGGCGATGTGCGCATCACTACGGC GGATCGGCAGATCGAGCGCGAAGCTTTGAACATGTCGATTCTGCTCGCCGCTTCGGTACCGGTCGGCGTGGCCTTGCTGGGTTGTCTGTGCCTGCTGTGG
Amino Acid Sequence
>transcriptional regulator
MHVLVCEDDELIASGIVAGLTAQGLTVEHVNTASKARAMLKVAEFDVMVLDLGLPDEDGLKLLQQLRQSGLEIPVLILTARDSVTDRVDGLQAGADDYLL KPFDLRELFARLQTLLRRVAGRSVNLIEHGALTYDPSSRETRLAGQPVDLSRREQSLLQALLHNRGRVLSTEQLKDSVYGFNDELESNALNVHIHHLRSK LGKGIVETVRGLGYRLGPADGAEQGK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site