Pseudomonas sp. PTA1, EW80_RS11435
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1 | 23 | - |
| NCBIfam | TIGR03696 | JCVI: RHS repeat-associated core domain | IPR022385 | Rhs repeat-associated core | 266 | 342 | 2.5E-29 |
| Pfam | PF05593 | RHS Repeat | IPR031325 | RHS repeat | 135 | 174 | 7.2E-6 |
| Gene3D | G3DSA:2.180.10.10 | - | - | - | 4 | 342 | 1.5E-77 |
| PANTHER | PTHR32305 | - | - | - | 241 | 345 | 2.7E-29 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 340 | 377 | - |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 158 | 190 | 2.1E-7 |
| NCBIfam | TIGR01643 | JCVI: YD repeat (two copies) | IPR006530 | YD repeat | 60 | 91 | 0.0049 |
| Pfam | PF03527 | RHS protein | IPR001826 | RHS protein | 241 | 273 | 5.5E-16 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 349 | 363 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.