Pseudomonas sp. PTA1, EW80_RS10435

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PTA1 EW80DRAFT_scaffold00009.9_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGATAACTGTTGTTCAGCTCCAGCTCGATTTGCACCTCCGGGTATTGCCCGGAAAACTCTAGCAGCAAGCCATCGAAGAAGGTCTCGCCGAGCGACACC GGAACCGTCATGCGCACGGGGCCGGCCATGTCGTCCTTCAACCGTGCCAAAGCCTGCCGTGCGCGTTCGACCTGGATCACCAGCGCCTGGGCCTGCGGCA GCAGCGCCGCCCCCGCCGCCGTCAGACTCAAGCGCCGGGTGGTGCGTTGCAGCAATACCACACTGAACTGCGCTTCGAGCTGGCTGATGCGCTTGGACAA CTGGCCTTTGCTGCAGCCCAACTGCTGCGCCGCAAGGGTGAAACTGCCGGCCTCGATCAGCACAGCGAACGCGGCGAGATCATCCATTTCGCTCATGGAT TGTTTCCAATTGAAAACCAAAGGTTGCCTATTAGTGCGCTTATCCGCTGAAAAAACCACCCTAGACTGAAACCTCATTCACACACATGGGGTACAGCACG
DNA Sequence for Gene
>EW80_RS10435
ATGAAAATTCTGTTGATAGGCGCAGGCGGCACCATCGGTTCCGCGGTGGACAAAGAGTTGTCGCAACGCCACGAGGTCATTCGTATCGGTCGTAACAGCG GTGACTTGCAAGTGGATATCAGCGACAGCGCCTCGATCCGCAAGCTGTTCGAACAGACCGGCAAGTTCGATGCGCTGATCTGCGCGGCGGGCAACGTGAC GTTCGCAGCGCTGGACGACATGACCGAAGACAGCTTCGCCCTCGGCCTGAAAGACAAACTGATGGGTCAGGTCAATCTGCTGCTGATCGGCCGCGAGTAC GCCAACGATGGCGCTTCGTTCACGTTTACCACCGGCGTGCTCAGCCACGACCCGATTCGCAGCGGTGCCTCGGCAGCGCTGGTCAACGGCGCCATCGACA GCTTCGTCCGCGCCGCCGCCATCGAACTGCCGCGTGGCCTGCGGGTGAACTCGGTAAGCCCGACCGTACTCACCGAAGCCCTCGGCAAATACGCGCCCTA CTTCCGTGGCTTCAAGCCGGTTCCTGCAGCGGAAGTGGCATTGGCCTACGCGAAAAATGTCGAAGGATTGCAAACAGGGCAGACGTTTCACGTGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATGATTAATCGATCAAGGTAGGTAAAAGCCGTTTGGCGACAGACCGCGACATAGAGATCCTGAACTCCCCGCCCAGCTCGGATCGCACTGTCGCCGTGGA AATGTGCTGGCCGTTGATCGAAAGACTCAATGGCTGGCCCATCGCCTCATGACTGATTGCCTTAGCCCTCGCAGTGGCTACGGGTGTCAACACCAGGGAT AGTTCGACAAGATCCGGATTAGGCCCGTGATCATCCTTGAGCAGCATTACCATCTTTGTGAAATCAACCCCTGAAGAGAAAGCCAGATCGGCTGCCTGGA CGCTGACAGCGCTTGCAGATGCCAACAGCAACAGCGCAATTTTCCATCTCATTCAACACTCCCTGATCTATCAAAAAACGTGCAAGAGACTATGCGATGC TCCCACGCCCGACTCAATAGTGGCAGACCAGACCTTGTGATAGGCACTCAGCCTCAGTAACGTGGCAGCACTTGTCTGGAGAGCCAAAGATGCGTGTTGC
Amino Acid Sequence
>short-chain dehydrogenase
MKILLIGAGGTIGSAVDKELSQRHEVIRIGRNSGDLQVDISDSASIRKLFEQTGKFDALICAAGNVTFAALDDMTEDSFALGLKDKLMGQVNLLLIGREY ANDGASFTFTTGVLSHDPIRSGASAALVNGAIDSFVRAAAIELPRGLRVNSVSPTVLTEALGKYAPYFRGFKPVPAAEVALAYAKNVEGLQTGQTFHVA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site