Pseudomonas sp. PTA1, EW80_RS08705 (obgE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PTA1 EW80DRAFT_scaffold00007.7_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTATTCAGGCTTAATTACAGCCTAATTCCTCACTAGGAGAATTGAACTCATGGCACACAAAAAAGCTGGTGGTAGTACCCGTAACGGTCGCGACTCAGAA GCCAAACGCCTTGGCGTGAAGATGTATGGCGGCCAGGTCATCAAGGCCGGCAACATCATCGTGCGTCAGCGCGGCACCCAATTCCACGCTGGCTACGGCG TTGGCATGGGCAAGGATCACACTCTCTTCGCTAAAATCGAAGGCGTGATCAAGTTCGAAGTAAAGGGCGCCTTCGGTCGTCGTTACGTGAGCGTAATCGC GGCTTAATCGCGAGATCGCTGGAGAAGCCCTGTCTTGCGACGGGGCTTTTTCGTTTGTGGGGTGAGTCTCTTGCAAAGCTGTTTGTATGGGCTGTCGGCG TGCGATGCAGGTCGTGTCTTGGGGTCGCTGCGCTCATTTTTGCAAGAGTCTTATGTCTTGATTGTTTTTCGGCTCGTCCGTACGGCGAGAGGCGTTGGTT
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| DNA Sequence for Gene |
>EW80_RS08705
|obgE
ATGAAGTTTGTTGATGAAGTATCGATTCGCGTAAAGGCCGGTGACGGTGGCAACGGTGCCATGAGTTTCCGCCGGGAAAAATTCATTGAAAACGGCGGTC CGAACGGCGGTGATGGCGGTGACGGCGGTTCCATCTACATGATGGCCGACGAAAACCTCAATACCCTGGTCGACTACCGTTACACCCGTCACTTTGATGC CGAGCGTGGCTCCAACGGCGGCAGCACCGACTGCACCGGCAAGAAGGGCGAAGACCTGATCCTGCGCGTGCCGGTCGGCACCACCGTGATCGACTCTGCC ACTCAGGAAGTCATCGGCGACCTGACCAAGGCTGGTCAGAAACTGATGGTAGTGCAGGGCGGCTGGCACGGTCTGGGTAACACCCGTTTCAAATCCAGTA CCAACCGTGCGCCGCGTCAGACCACGCCAGGCAAGCCGGGCGAGCAGCGCGACCTGAAGCTGGAAATGAAAGTGCTGGCCGACGTCGGTCTGTTGGGCTT GCCGAACGCCGGTAAAAGTACCTTTATCCGTTCGGTCTCGGCCGCCAAGCCGAAAGTCGCCGACTACCCGTTCACCACACTGGTGCCGAACCTGGGTGTG GTCAGTGTCGATCGCTGGAAAAGCTTCGTCATTGCCGACATTCCGGGCTTGATCGAAGGCGCTTCCGACGGTGCCGGCCTGGGCATTCGCTTCCTCAAGC ACCTGGCGCGTACGCGTCTGCTGCTGCACCTCGTCGACATGGCGCCGCTGGATGATTCCAGTGCTCCAGACGCGGCTGAAGTGATCGTCAACGAGCTGAT CAAGTTCAGCCCGTCGCTGGCCGAGCGTGATCGCTGGCTGGTGCTGAACAAGTGCGACCAGATTCTTGAGGAAGAGCACGATGCTCGCGTCAAGGAAATC GTCGATCACCTGGAGTGGACCGGTCCGGTGTACGTGATCTCGGCCATCGCCAAGATCGGTACCGAGCGTCTGTGCCACGACATCATGCGCTACATGGAAG ATCGTGCCGATCGCCTCGCCGCAGATCCTGCGTACAAGGAAGAGCTGGCCGATCTCGATCAGCGCATCGAAGACGAAGCCCGTGCACAGTTGCAGGCGCT GGACGACAAGCGTGCCCTGCGTCGCAGTGGCGTGAAGTCGGTCCATGACATCGGCGACGATGACTGGGACGAAGAAGATGTGGATGACGAAGATGGTCCG GAAATCATTTACGTGCGTGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCGTTGCGATAAACTTGAACGCCGCTCAATCGAGCGGCGTTTTAGTATCCGGAAATCGATCGTTGGTCAGCAATCGCCACGATTAACGTCACGGGCAGT GCCAGGTCGCGCTGCCCTCAAGCTAAGGTTGAAGATGATGCGGAGCAAGGTGACAGGTGCGCAGCGTTGGGTCGTGAAGATCGGCAGCGCTTTGCTGACA GCTGACGGCAAAGGGCTGGATCGCGCGGCAATGAGTGTCTGGGTCGAGCAGATGGTGGCGCTGCATGAGGCGGGCGTCGAGCTGGTGCTGGTGTCCTCCG GGGCGGTAGCGGCCGGCATGAGTCGCTTGGGCTGGACCGCACGACCCAGTGCCATGCACGAGCTCCAGGCGGCCGCTGCAATCGGTCAGATGGGGTTGGT GCAGGCGTGGGAGTCGAGCTTCGCCGAGCATGGCCGGCACACTGCGCAGATTCTCCTGACCCACGACGACCTGTCCGACCGCAAGCGCTACCTCAATGCC
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| Amino Acid Sequence |
>GTPase CgtA
MKFVDEVSIRVKAGDGGNGAMSFRREKFIENGGPNGGDGGDGGSIYMMADENLNTLVDYRYTRHFDAERGSNGGSTDCTGKKGEDLILRVPVGTTVIDSA TQEVIGDLTKAGQKLMVVQGGWHGLGNTRFKSSTNRAPRQTTPGKPGEQRDLKLEMKVLADVGLLGLPNAGKSTFIRSVSAAKPKVADYPFTTLVPNLGV VSVDRWKSFVIADIPGLIEGASDGAGLGIRFLKHLARTRLLLHLVDMAPLDDSSAPDAAEVIVNELIKFSPSLAERDRWLVLNKCDQILEEEHDARVKEI VDHLEWTGPVYVISAIAKIGTERLCHDIMRYMEDRADRLAADPAYKEELADLDQRIEDEARAQLQALDDKRALRRSGVKSVHDIGDDDWDEEDVDDEDGP EIIYVRD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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