Pseudomonas sp. PTA1, EW80_RS08215
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PTA1 EW80DRAFT_scaffold00007.7_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACGCCGCCGCCGCAGCAACACGCCGCGGCCGTGGTGCCCGTGCAGATCGATGCAAAAAAAAACGCTTCTGCACCAGCGTCTGGCCAGTATCTGCAGGTG GGCGCGTTCGCCAACCCGGACGCTGCCGAGCTGCTGAGGTCGAAGCTCAGCGGGATGGTGAGCGCGCCGGTGTTCATCAGCTCGATCGTGCGCAATCAGC AGACCCTGCACCGGGTACGCCTGGGGCCGATCGGCTCGCCGGGTGAGATCGCCCAGGTGCAGAACAGTGTGCGGCTGGCCAATCTGGGTTCGCCCAGCGT GGTCACCGAGTAACACGTAGACCTTGATTGACGGTTCACTTGCGGTATTCGGGGGGTGAACCAGGTTGTTGGCTCGTCGAAGAACAAAAGCCCGGCAAGG GTGACTGGAGTGAGCAACTGAACACGCGATGGCCCGTTAGAAGGCTGTCTGAATAAGTTTTGCCTTCGGGCAAGTTTCCATTAGCGATTTCGAGAGACGG
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| DNA Sequence for Gene |
>EW80_RS08215
ATGAACATCACCACCTTTGCCAAACGCCTGTGTCTGCTAGTCCCGCTGCTCCTCTCGCCAGCCGCCTTCGCGGCCGAGATGATGCCGTCGCCACCACAAC TGGCCGCCAAGGCCTATGTTCTGATGGACGCCAGCAGCGGCAACGTGCTGGTCGAAAACAACGGCGACCAGCGTCTGCCACCGGCCAGCCTGACCAAGCT GATGACCGCGTACATCGCGACCCTGGAAATCCGTCGCGGCCAGATCGGTGAAAACGATCCGGTGACCGTCAGCGAAAACGCCTGGCGCACCGGCGGTTCG CGGATGTTCATCAAGGTCGGTTCGCAGGTCACTGTCAGCGACCTGCTGCACGGCATCATCATCCAGTCCGGTAACGACGCCAGCGTCGCCCTGGCCGAGC ACATCGCCGGCAGCGAAGATGCGTTCGCCGATCTGATGAACAAGACCGTCACCGAACTGGGCATGACCAATACCCACTTCATGAACCCGACCGGTCTGCC AAACCCTGAGCACTACTCGTCGGCGCACGACATGGCGATCCTGGCCCGTGCGATCATCCACGAAGACCCGGCTCACTATGCGATCTACTCGCAGAAAGAG TTCTTCTGGAACGGCATCAAGCAGCCTAACCGCAACCTGCTGCTGTGGCGCGACAAGACCGTTGACGGTCTGAAAACCGGCCACACCGATGAAGCCGGCT ACTGCATGGTGTCCTCGGCGGTACGTGACGGCCAGCGCCTGATCGCCGTGGTGTTCGGCACCAACAGCGAAGTGGCCCGCGCGGCTGAAACCCAGAAGCT GCTGACCTACGGTTTCCGCTTCTTCGAAACCCAGACCTTCTACCAGAAGGGCACTGAACTGGCGCAGGCGCCGGTATGGAAAGGCACCACCAGCCAGGTC AAGGCCGGCCTGGCGCAAGACCTGACCATGACTCTGCCAAAAGGCCAGCTGAAGAAGCTCGCTGCCAGCATGACCATGAACCCGCAACTGGTTGCGCCAA TCGCCAAGGGCGACGTGATCGGTAAAGTCGAAGTCAAACTGGAAGACAAGGTGGTGCACAGCGCTGACCTGATCGCTCTGGACGGCGTCGAGGAGGGTGG TATCTTCCGCCGCATGTGGGATAGCATCCGTCTATTCTTCTACGGCTTGTTCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTTTGTGTTGACCTGCATGGCCCCGCCCCGATCCGGTGCGGGGCCATGTGCGTTACCACGGCTTGCGCTATAGAGGCCGTTACGCCATGACCGATACCGA AGTAAAGGCGCCAAAGATCGAATTCCCCCAGACTGATTATCCGATCAAGGTGATCAGCGATACGGGTGTTGGCAACAAGGACAAGATCATCGCGATCGTC CTGAAACACGCGACCATCAATGATGAGCGCATCGACGAGCGTCAAAGCAGCAACGGCAAATACACCACCATCCAGTTGCACATCGTCGCCACCGACCAGG ATCAGCTGTACAACATCAACAGCGAACTGCGGGCTTCCGGCATCGTGCACATGGTGTTGTGATGCACGGCACGCTGGGCTTTCGCGAACTGGGCCAGATG CCTTACGAGCCGGTCTGGCATGCCATGCAGCGCTTTACCAACGAACGCGGCAATGCGGCCGCCGACGAAATCTGGCTCGTTGAACACCCGCCGGTGTTCA
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| Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MNITTFAKRLCLLVPLLLSPAAFAAEMMPSPPQLAAKAYVLMDASSGNVLVENNGDQRLPPASLTKLMTAYIATLEIRRGQIGENDPVTVSENAWRTGGS RMFIKVGSQVTVSDLLHGIIIQSGNDASVALAEHIAGSEDAFADLMNKTVTELGMTNTHFMNPTGLPNPEHYSSAHDMAILARAIIHEDPAHYAIYSQKE FFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGQRLIAVVFGTNSEVARAAETQKLLTYGFRFFETQTFYQKGTELAQAPVWKGTTSQV KAGLAQDLTMTLPKGQLKKLAASMTMNPQLVAPIAKGDVIGKVEVKLEDKVVHSADLIALDGVEEGGIFRRMWDSIRLFFYGLFN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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