Pseudomonas sp. PTA1, EW80_RS07070

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PTA1 EW80DRAFT_scaffold00006.6_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CACGGCAAACCGATCCTGCAATTCGGCAAGCTCAACGTGGGTCTGAGCAAGCTGGAACCGGCTGGCAACTACGCACTGAAACTGACCTTCGACGACGGTC ATGACAGCGGCCTGTTCACCTGGGAATACCTCTATGAACTCGGCAAGCGCCAGAACGAACTCTGGGACGATTATCTTGCCGAGCTGCGCGCGGCCGGAAA ATCCCGCGATCCGAACGAGTCGTTCGTCAAGCTGATGCTCTAGGCCGTGGCTCTCGCTCTTTAGAGGGCATTTTCTAACTTCATCTGTTTGAATGCTCCG CGCATATGGCCCCGGATCGGCCGCTTGCGAAAAAAATTAAACTCGGGTAACCAATGGAGCTGGCAAGTTCCCTGCAGTGCTCTACGACTGTAAAGCAGCT ATGCAGAATCAACGGTCACCCGAGCAGTAGTACCCGGCATTGGCTGTGGAAGCGACAGCGTGAAACCGGGTACTCGTCTCAGGACAATGGAGCGTCGTAG
DNA Sequence for Gene
>EW80_RS07070
ATGAGTGACAAGAATAACGATGACCTGAAGTACCAAGCCTCGGAAAACACTCTGGGGCTTAACCCCGTCGTCGGGCTGCGCGGAAAGGATCTGCTGGCCT CTGCTCGAATGGTGCTGAAACAGGCCATCAGACAACCGATTCACAGCGTCAGGCACGTGACCCATTTCGGCCTCGAGCTGAAGAACGTGCTGCTGGGTAA GTCCGCGCTGCAACCGGCCGGTGACGACCGCCGTTTCGCCGACCCGGCGTGGAGCCAGAACCCGCTGTACAAACGTTATCTGCAAACCTACCTGGCCTGG CGCAAGGAACTGCATGCCTGGATCGATGACAGCAGCCTGTCCCCCAAGGACATCGCTCGCGGGCATTTCGTCATCAACCTGATGACCGAAGCCATGGCGC CGACCAACACGGCGGCCAACCCGGCGGCGGTCAAACGCTTCTTCGAAACCGGCGGCAAAAGCCTGCTCGATGGCCTCTCGCATCTGGCCAAGGATCTGGT GCACAACGGCGGCATGCCGAGCCAGGTCAACATGGGCGCGTTCGAAGTCGGCAAGAGCCTCGGCGTCACCGAAGGCGCGGTGGTGTTCCGCAATGATGTG CTGGAGCTGATCCAGTACCGGCCGATCACCGAGCAGGTCCACGAACGCCCGCTGCTGGTAGTGCCGCCGCAGATCAACAAGTTCTACGTCTTCGACTTGA GCCCGGACAAGAGTCTGGCGCGCTTCTGCCTGCGCAACAATGTGCCGACTTTCATCATCAGCTGGCGCAACCCGACCAAGGCCCAGCGCGAGTGGGGTCT GTCGACGTATATCGAAGCGCTGAAGGAGGCGGTCGACGTAGTCACCGCGATCACCGGCAGCAAAGACGTCAACATGCTCGGCGCCTGCTCCGGCGGCATC ACCTGCACCGCCCTGCTTGGCCACTACGCCGCGCTCGGCGAGAACAAGGTCAACGCCCTCACCTTGCTGGTCAGCGTGCTCGACACCACCCTGGACAGCG ACGTCGCCCTGTTCGTCGATGAGCAGACCCTGGAGACCGCCAAGCGCCACTCCTACCAGGCCGGCGTGCTCGAAGGCAAAGACATGGCCAAGGTCTTCGC CTGGATGCGCCCCAACGATCTGATCTGGAACTACTGGGTCAACAACTACCTGCTCGGCAACGAGCCGCCGGTGTTCGACATTCTGTTCTGGAACAACGAC ACCACCCGCCTGCCCGCTGCGTTCCACGGCGACCTGATCGAGATGTTCAAAAACAATCCACTGATCCGTCCCAATGCACTGGAAGTGTGCGGCACGCCGA TCGACCTCAAGCAGGTCACCGCCGACATCTTCTCGCTGGCCGGCACCAACGATCACATCACGCCGTGGAAGTCCTGCTACAAGTCGGCGCAGCTGTTCGG CGGCAAAGTTGAATTCGTGCTGTCGAGCAGCGGCCATATCCAAAGCATCCTCAACCCGCCGGGCAATCCGAAGTCGCGCTACATGACCAGCGAAGAGATG GCGGCAACCGCCGATGACTGGCAGGAAAATTCGACCAAGCACACCGATTCCTGGTGGCTGTACTGGCAGGCATGGCTGGCCGAGCGCTCGGGCAACCTGA AAAAGGCCCCGACGAAACTGGGCAACAAAGCGTACCCGGCAGGCGAGGCTTCGCCGGGCACTTATGTACATGAAAGATAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGCAAGCTTCAAGCTGCGAGCGACAAGCTGAGCGGGTTCTGCTTGAAGCTTGCGGCTTGCAGCTGCTCCCAACTGACCCGAAGGGTTTGACCCATGCCG CAACCGTTCATATTCCGCACCGTCGATCTGGATGGCCAGACCCTTCGCACGGCGGTGCGCCCCGGCAAGCCTCATTTGACGCCTCTGCTGATTTTCAACG GCATCGGCGCCAACCTGGAGCTGGTGTTCCCGTTTGTCGCGGCGCTCGACCCGGATCTGGAAGTGATCGCCTTCGACGTGCCCGGGGTCGGCGGCTCATC GACGCCGAACCGACCGTATCGCTTCCCCGGCCTGGCCAAACTGACGGCGCGGATGCTCGACTATCTCGACTACGGTCAGGTCAATGTGATCGGCGTGTCG TGGGGCGGCGCCCTGGCGCAGCAGTTTGCCTACGACTATCCCGAGCGCTGCAAGAAACTGGTACTGGCGGCCACTGCGGCCGGTGCGGTGATGGTGCCGG
Amino Acid Sequence
>poly(R)-hydroxyalkanoic acid synthase
MSDKNNDDLKYQASENTLGLNPVVGLRGKDLLASARMVLKQAIRQPIHSVRHVTHFGLELKNVLLGKSALQPAGDDRRFADPAWSQNPLYKRYLQTYLAW RKELHAWIDDSSLSPKDIARGHFVINLMTEAMAPTNTAANPAAVKRFFETGGKSLLDGLSHLAKDLVHNGGMPSQVNMGAFEVGKSLGVTEGAVVFRNDV LELIQYRPITEQVHERPLLVVPPQINKFYVFDLSPDKSLARFCLRNNVPTFIISWRNPTKAQREWGLSTYIEALKEAVDVVTAITGSKDVNMLGACSGGI TCTALLGHYAALGENKVNALTLLVSVLDTTLDSDVALFVDEQTLETAKRHSYQAGVLEGKDMAKVFAWMRPNDLIWNYWVNNYLLGNEPPVFDILFWNND TTRLPAAFHGDLIEMFKNNPLIRPNALEVCGTPIDLKQVTADIFSLAGTNDHITPWKSCYKSAQLFGGKVEFVLSSSGHIQSILNPPGNPKSRYMTSEEM AATADDWQENSTKHTDSWWLYWQAWLAERSGNLKKAPTKLGNKAYPAGEASPGTYVHER
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site