Pseudomonas sp. PTA1, EW80_RS03045
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PTA1 EW80DRAFT_scaffold00004.4_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATTCTCGCCCTCAACGCAGCGATCCAGGCATCGATGGCCGGCGACGCCGGGCGCGGTTTTGCCGTGGTTGCCGACGAAGTGCAGCGGCTGGCCGAGCGTT CGTCCGCCGCGACCCGGCAGATCGAAACGCTGGTGCGGGCGATTCAGGCCGACACCAATGAAGCGGTGATTTCCATGGAACAGACCACCACCGAAGTGGT GCGCGGCGCGCGACTGGCGCAGGATGCCGGTGTGGCTCTGGAAGAAATCGAAGGCGTATCCAAGACCCTCGCGGCGCTGATCCAGAGCATTTCCAACGCG GCGCAACAGCAGACGTCTTCGGCCGGGCAGATCTCGCTGACGATGAACGTGATCCAGCAGATCACCTCGCAAACCTCGTCGGGGTCCACCGCCACCGCCG AGAGCATCGGCAACCTGGCGAAAATGGCCAGTCAGCTGCGTCGTTCGGTGTCCGGATTCACCTTGCCGGCGGCGACAGATAAAGCGTGAGTGGAGTGGTT
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| DNA Sequence for Gene |
>EW80_RS03045
ATGGGTGATCGGCACGACTACGTGGCCCTGGAATGGGTCAAGGGCGAAATTGCCGAAACGCTGAGGCTGGCGCATCAGGCGATCGAAGCCGTGCTCGACG ATCCGCAGGCCTTCCCCGGGCTGGACGAGTGCCTGGCGTACATTCATCAGGTCCACGGCAGCCTGCAGATGGTCGAGTTCTACGGCGCAGCGTTGCTTGC CGAAGAAATGGAGCATCTGGTCGAAGCCCTGCAACATCAACGCGTGCCACACCGCGACGAAGCCCTGCACCTGCTGCTGCAAGCTCTGGGGCAACTGCCG CTTTACCTTGACCGCGTGCAGAGCGCCCGCCGCGACCTGCCGCTGGTAGTGTTGCCGCTGATCAACGATCTGCGCAGCGCCCGTGGTGAAAGCCTGTTGG CGGAAACCAGTCTGTTCAGCCCGCCACTGCCCGAGCTGGCGCTGCTCGGCGACGGGGCACTCGCCGCGCTGGAACCGCCCGATCTGCCGAACGTGCTGCG CAAACTGCGGCAGATGCTGCAAATGGCCCTGGTCGGGCTGCTGCGCGAACAGGATGACCAGACGCACCTCGGTTATCTGGCCAAGGTCTTTACCCGCCTT GAAGCGCTGAGCGGCGATGCGCCGTTGAGCCCGCTGTGGCAGATCGCCTCGGCGCTGGTCGAGGGCATGCGTGAGGGCGTCATCGCCAACAGTCCGGCGC TGCGCAGCCTGTTCAAGGACGCCGACCAAGAGCTCAAGCGCCTGCTCGAGCAGGGCATCGTCGGGCTCAATCAACCGGCGCCGGCCGAGCTGCTGAAAAG CCTGTTGTTCTATATTGCCAAAGCCGAACATCCCACCGGGCAGATGCTGACCATTAAAGATCACTACTCCCTGGACGACGCGTTGCCCGACAGCGCGATG GTCGATGAAGAACGCGCGCGCCTCGCCGGCCCCGACCGCGATGCCATGCGCTCGGTGCTGGCGGCGCTGTGCGAAGAGCTGGTGCGGGTCAAGGAGCGCC TCGATCTGTTCGTGCGCAGCGACCGCCAGCACGCCTCGGATCTGGACAGCCTGCTCGCACCGCTGCGGCAGATTGCCGACACCCTCGCGGTGCTGGGTTT CGGCCAGCCGCGCAAAGTCATCATCGACCAACTGGCAGTGGTGCTCAGCCTCGCCCAAGGCCAGCGCGAACCGAACGACGCGATTCTCATGGACGTCGCC GGGGCCTTGCTCTACGTCGAAGCGACGCTGGCCGGCATGGTCGGCACGGTGGAGACGCAAAGTGCCGAAGACGCGCGCCTGCCGACCACCGACCTGACGC AGATCCATCAGATCGTGATCAAGGAAGCGCGCATCTGCCTGCAACAGGCCAAGGACATGATCGTCGACTACATCGACGCCGATTGGGACCGCCAGCATCT GCAATCGCTGCCCGAACTGCTGACGCAGGTGCGCGGCGCGCTGGCGATGATTCCGCTGGCCCGCGCAGCGAGTCTGGTCGAGGCCTGCAACGGTTTCATT CGCGAGCATTTGATGCTCGATGCCCACGAACCGGGCTGGGAACAACTCGATCATCTGGCCGATGTGATCAGCAGCCTGGAGTATTACCTCGAACGCCTGA GCGACGACCCGCAGGCACCCGCCGAACATCTGCTCGATGTCGCGCAAAACAGCCTCGCCAGCCTCGGCTTCTTCGCCAACGAGCAGCCCGGCGAAGCGCA GGTGCCGGTGCTCGATGAGGTGCTCAGCCCCAGCGAAGCGCAGCTCATGCAGGATCTGCAAACCCTCGACGACCCTGACGTCGTGCAGTCGCTGGCCGAG GTGCTGGCCAGCCCGCTGTCGGCGCTCAACCCGCCGGCGCGCAACAGCCCCGACAGCCTGATGCCGCCGCCGGCCGATGAAGAACCGGTCGACGACGAAC TGCGCGAAGTGTTCCTCGAAGAGACCGACGAAGTCCTCGCGGTCCTTCACGAATACCTGCCGCGCTGGAGCGCCAATCCCCAGGACCGCGCCGCGCTGAC CGAACTGCGTCGGGCCTTCCATACCTTGAAGGGCAGCGGGCGCATGGTCCGCGCGTTGGTCCTTGGCGAACTGGCCTGGGCGGTGGAAAACCTGCTCAAC CGCGTGCTCGAACAAAGCGTCGAACCCGGCGCAGTGCTGCGCCAGTTGCTCGGCGACACCGTGTTGCTGCTGCCCGAGCTGATCAACGAATTCGCCACCC AGCGCCAGCGCCAACGCAACGATGTCGACCAACTCGCCGCCCGCGCCCACGCGTTGGCCAAAGGCGATGAACCGCTGGCTGCCGAAGACACCGACGACGT CGCCGCGCTTGATCCGCTGCTGCTGGAAATCTTCCGCAAAGAAGCCGAAACCCACCTCGCCAGCCTCAACCGTTTCCTCGATCAGGCCGCCGAACAGGTG CCGTTACCGGCCAGCGACGAGCTGCAACGGGCGCTGCACACGCTCAAGGGCAGTGCCTCGATGGCCGGCGTATTGCCGATGGCCGAACTGGCGGCGTCGC TGGATCAACTGGCCCGCGAGTTCAAGGCGCACCAGTTGCCGCTGGATCTGGACGAGGTCGAACTACTGCTCGAAGCCGAGGGCTTGTTCCGCGTCGGCCT GCGTCAGCTCAAACACGATCCGCTGGCGCCGATTGTCGGTGCGCAGTCGCTGATCAAACGCACCGAGGCGCTGCTCGCCGAGCGCCTGCAAGCCAGCTCC GATGGCGCTGACAGCGGCCTGCGCCTCAAGCGCGATCCGCAACTGATCAACAACTTCCTCGCCCAGGGCATGGACATCCTCCTCAACGCCGAAAACCTTT TGCAGCGCTGGCAGCAACACCCCGGCGAACGCCAGGAACTCAGCGCCTTGCTCGATGAGCTGACCACTCTGGGCGAGGGCGCGCACCTTGCCGATCTGCT TCCGGTCGATGGCCTCTGCGAAGCTTTGCTCGACCTGTATGGCGCGGTGGAAGAAAGCAGCCTGGCGGTCAGTGAGCGGTTTTTCCACGAGGCGCAACTG GCCCACGAAGCGCTGATCAACATGCTCGACGAGCTCGCTGCCGGCCAGGAAGTCACCCCGCAGCCGGAGCGGATTCGCGCCTTGCAGGATCTGCTTGACG AAGGTCTCGACCCGGCGGCGATGGGCCTGATCCGCAGCGACGGCAGCCGCACCCTGGACATTCGCGAACTGGGCAGCGCCACCGCGCAATTGCAGCAATC GGTTGCCGCCCTTGAGCCTGACGACGAGATCGTCGAAATCTTCCTTGAAGAGGCGGTGGACATTCTCGACAGCGCCGGGCAAGCCTTGCAGCGCTGGCGC AAGGATCCGGACAACGCCGCGCCGCTGTCGTCATTGCAGCGCGACTTGCACACGCTGAAGGGCGGCGCGCGCATGGCCGAGGTCGAGGTTATCGGCGACC TTGCCCAGGAGCTGGAAAACCTCTACGAAGGGCTGGTCGATCGACGCTACAACCACAGCGCCGCGCTCGAAGGTTTGCTCCAGCAAAGTCACGAGCGTTT GGCGCTGATGCTGGAGCAACTGCAAGCGCATCAAGCGCTGACCCCGGCGCAGGATCTGATCGACGCGATCCGTCAATTGCGTCAGGGCCAGGCCGCCAGC GAATCTGCCCCCGCAGCGGTCGAACACGACAACGCCGGGCATGATCCGGAACTGTTGGAAATCTTCCTCGAAGAAGGTTTCGACATCATCGAAAGCTCCG GCGCCGCGCTGTTGCGCTGGCAGGCCGAGCCGGGCAACCGTCAGGAAATCGAAACCCTGCTGCGCGATCTGCACACCCTCAAGGGCGGCGCGCGGATGGT CGAAATCGGCCCGATCGGCGACCTCGCCCATGAGCTGGAATTTCTCTACGAAAGTCTCTCTAGCGGTGCGCTGCAACCGTCCGCCGAACTGTTCGCGCTG GTGCAGCGCGGCCATGACCGACTGGCGCAAATGCTCGATGGTGTGCGCGCCGGGCAGCCGTGCCCACCGGCCGATCGGCTGATCAATGCGATCCAGAATT TCAGTCACCCGGTGCAGGTTGAAGCGCCGCCGGCGCCGGCTCCAGTCATCAAGCCCGAGGCCACGCCGCCGAGCGCCGATGCTGGCGCGGACATGGTCAA GGTCTCGTCCGAACTGCTCGATGAGCTGGTCAATCTGGCCGGGGAAACCTCGATCTTTCGTGGGCGAATCGAGCAGCAAGTCAACGATGCGCAGATTGCC CTCAACGAGATGGAAACCACCATCGAGCGCATGCGCGATCAGTTGCGCCGCCTCGACACCGAAACCCAGGGGCGCATTCTCAGCCGCCAGCAAGTCGATG GCGAACGCCTCGGTTATGAAGACTTCGACCCGCTGGAAATGGACCGCCATTCGCAGCTCCAGCAACTGTCGCGGGCGCTGTTCGAATCCGCTTCTGACCT GCTCGACCTCAAGGAAACCCTCGACCGCCGCAATCACGACGCAGAAAACCTGTTGCAACAACAGGGGCGGATCAACACCGAGCTGCAGGAAGGCCTTATG CGTACGCGCATGGTGCCGTTCGAACGCATGGTGCCGCGTCTGAAACGCATCGTTCGTCAGGTCGCCGAAGAGCTGGGCAAGGATGTCGCGTTCGTCGTCG GCAACGCTGATGGCGAGATGGATCGCAACGTGCTGGAGCGGATGGCCGCGCCGCTGGAACATATGCTGCGCAATGCCGTCGACCATGGCCTCGAATCTGC CGAGGTGCGATTGGCGGCGGGTAAACCGGCGCAAGGGCAGATCACCCTCGATCTGTCCCGCGAGGGCGGCGACATGGTTTTCGACATCCGCGATGACGGC GCCGGTGTGCCGCTGGAAGCCGTGCGGCGCAAGGCGATCAAGCGCGGTCTGCTGGCGCCCGACGCCGAGATCAGCGACCGCGACGTGTTGCAGTTCATCC TTCAGCCGGGTTTCTCCACGGCGGAAAAGATCACCCAGATTTCCGGGCGTGGCGTCGGCATGGACGTAGTCCACGAAGAGGTGCGTCAGCTCGGCGGCAG CATGAGTATCGATTCGGTGCCGGGGCAGGGCGTGCATTTCCGCATTCGCCTGCCGTTCACCGTGTCGGTCAACCGCGCGCTGATGGTGCAGTGCGGCGAG GATCAATACGCGATCCCGCTGAACACCATCGAAGGCATCGTGCGTGTGTTGCCGAATGATCTGGAAGGGCATTTCCGTCACGATCCACCGAGTTATCAAT ACGGCGGCCAGCGTTATGAGCTGTGCTATCTCGGCGAGCTGTTGAAGACTGCGCCACGGCCGAAACTGCTCGGGCAGAACCTGCCGTTGCCGGTGCTGCT GGTGCATTGCAACGACCGCCATGTTGCGGTGCTGGTCGACTCCATGGCCGGCACCCGTGAGATCGTGGTCAAGAGTCTCGGCCCGCAGTTCGCGGCGGTG CAGGGCGTGTCGGGGGCGACGATTCTCGGCGACGGCCGGGTGGTGCTGATTCTGGATCTGCTCGCACCGATCCGGGCGATGCAGGCGCGGCTGGCGCAGG AACCGACGCCCACGGAGATCGACAGCGAACCGCACAAGCCGCTGCTGATCATGGTCGTCGATGACTCGGTAACGGTGCGCAAAGTCACCAGCCGTTTGCT CGAGCGCCACGGCATGAACGTGCTGACTGCCAAGGACGGCGTCGATGCGATGCTGCTGCTCGAAGAGCACCTGCCCGACCTGATGCTGCTCGACATCGAA ATGCCGCGCATGGACGGCTTCGAAGTCGCCACCCAGGTGCGCGCCGACGAACGCCTGTGCCACTTGCCGATCATCATGATCACCTCGCGCACCGGGCAGA AACACCGCGACCGCGCCATGGCCATCGGCGTCAACGACTACCTCGGCAAGCCGTATCAGGAATCGGTGTTGCTGGAGAGCATCGCCCAGTGGAGCAAGAA ACATGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCACCGGCACAACCCGCGCACCAGCCAGCTCACCGGGCTGCTGCTGCCGCTGGCCGATCGCAACCTGATCCTGCCCAATGTAGCCATCGCCGAGCTGATC GACTACCAGGCCAGCGCCTTCGACCTCGACACTCCGCCGTGGTACCTGGGCCGGGTAACGTGGCGCGAGCGGCAGATTCCGTTGATCAGTTTCGAATCGG CCTGCGGGCAGAAAATCGTCATCGGCGAACGGGCGCGGATCGTCATTCTGAATGCGCTGGGCGGCTTGCCCGAGCTGAGATTCATCGCCCTGTTGGTGCA GGGGATTCCTCGGTCGTACAAGCTGGACAGTCAGTTGAGTTATGTCGATGTGCCGTTGTGTGCGCTGGAGCAGGCGGCGGTGCAGGTCGGCGAGCAGGTG GCGAAGGTGCCGGATTTGTTGGGGCTGGAGAAGTTACTGGTGGATGCGGGATTGGCCCGCTGATCCAAGGCTTTCGCTTGATCGTTCCCACGCTCCGCGT
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| Amino Acid Sequence |
>histidine kinase
MGDRHDYVALEWVKGEIAETLRLAHQAIEAVLDDPQAFPGLDECLAYIHQVHGSLQMVEFYGAALLAEEMEHLVEALQHQRVPHRDEALHLLLQALGQLP LYLDRVQSARRDLPLVVLPLINDLRSARGESLLAETSLFSPPLPELALLGDGALAALEPPDLPNVLRKLRQMLQMALVGLLREQDDQTHLGYLAKVFTRL EALSGDAPLSPLWQIASALVEGMREGVIANSPALRSLFKDADQELKRLLEQGIVGLNQPAPAELLKSLLFYIAKAEHPTGQMLTIKDHYSLDDALPDSAM VDEERARLAGPDRDAMRSVLAALCEELVRVKERLDLFVRSDRQHASDLDSLLAPLRQIADTLAVLGFGQPRKVIIDQLAVVLSLAQGQREPNDAILMDVA GALLYVEATLAGMVGTVETQSAEDARLPTTDLTQIHQIVIKEARICLQQAKDMIVDYIDADWDRQHLQSLPELLTQVRGALAMIPLARAASLVEACNGFI REHLMLDAHEPGWEQLDHLADVISSLEYYLERLSDDPQAPAEHLLDVAQNSLASLGFFANEQPGEAQVPVLDEVLSPSEAQLMQDLQTLDDPDVVQSLAE VLASPLSALNPPARNSPDSLMPPPADEEPVDDELREVFLEETDEVLAVLHEYLPRWSANPQDRAALTELRRAFHTLKGSGRMVRALVLGELAWAVENLLN RVLEQSVEPGAVLRQLLGDTVLLLPELINEFATQRQRQRNDVDQLAARAHALAKGDEPLAAEDTDDVAALDPLLLEIFRKEAETHLASLNRFLDQAAEQV PLPASDELQRALHTLKGSASMAGVLPMAELAASLDQLAREFKAHQLPLDLDEVELLLEAEGLFRVGLRQLKHDPLAPIVGAQSLIKRTEALLAERLQASS DGADSGLRLKRDPQLINNFLAQGMDILLNAENLLQRWQQHPGERQELSALLDELTTLGEGAHLADLLPVDGLCEALLDLYGAVEESSLAVSERFFHEAQL AHEALINMLDELAAGQEVTPQPERIRALQDLLDEGLDPAAMGLIRSDGSRTLDIRELGSATAQLQQSVAALEPDDEIVEIFLEEAVDILDSAGQALQRWR KDPDNAAPLSSLQRDLHTLKGGARMAEVEVIGDLAQELENLYEGLVDRRYNHSAALEGLLQQSHERLALMLEQLQAHQALTPAQDLIDAIRQLRQGQAAS ESAPAAVEHDNAGHDPELLEIFLEEGFDIIESSGAALLRWQAEPGNRQEIETLLRDLHTLKGGARMVEIGPIGDLAHELEFLYESLSSGALQPSAELFAL VQRGHDRLAQMLDGVRAGQPCPPADRLINAIQNFSHPVQVEAPPAPAPVIKPEATPPSADAGADMVKVSSELLDELVNLAGETSIFRGRIEQQVNDAQIA LNEMETTIERMRDQLRRLDTETQGRILSRQQVDGERLGYEDFDPLEMDRHSQLQQLSRALFESASDLLDLKETLDRRNHDAENLLQQQGRINTELQEGLM RTRMVPFERMVPRLKRIVRQVAEELGKDVAFVVGNADGEMDRNVLERMAAPLEHMLRNAVDHGLESAEVRLAAGKPAQGQITLDLSREGGDMVFDIRDDG AGVPLEAVRRKAIKRGLLAPDAEISDRDVLQFILQPGFSTAEKITQISGRGVGMDVVHEEVRQLGGSMSIDSVPGQGVHFRIRLPFTVSVNRALMVQCGE DQYAIPLNTIEGIVRVLPNDLEGHFRHDPPSYQYGGQRYELCYLGELLKTAPRPKLLGQNLPLPVLLVHCNDRHVAVLVDSMAGTREIVVKSLGPQFAAV QGVSGATILGDGRVVLILDLLAPIRAMQARLAQEPTPTEIDSEPHKPLLIMVVDDSVTVRKVTSRLLERHGMNVLTAKDGVDAMLLLEEHLPDLMLLDIE MPRMDGFEVATQVRADERLCHLPIIMITSRTGQKHRDRAMAIGVNDYLGKPYQESVLLESIAQWSKKHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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