Pseudomonas sp. PTA1, EW80_RS02240
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PTA1 EW80DRAFT_scaffold00004.4_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCCCACGCTCCGGCAGTGCGATGTTCCACTACCAGCCGGCTGACAACCCGAACAAAGTCATCAACGCTGGCTATCGCTATCGCAATGACCAGATCCGT TACGACCAGAACACCGGCCAGTGGTCGGTGGGCGGCGGCGACTACGGCACCCCGGGTCAACCTGGCTACGTGAAGGACTACTACAAGATCCAGCAGCATG ACTTCTCGGTCATCTGGCCGATCGTTCCGCAGTGGAACGCCATCAGTCGCTGGCAGTACGACTACAACCGCAATCGCACGCTGGAAGCCTTCGGTGGTTT CGAATACGACAACTGCTGCTGGAAACTGCGCCTGATCAACCGTTACTGGGTCGCCTATGACGAAAACAGTCAGAACGCCCCGGAAAACGAAAAAGGCGAC CATGGCATCTTCCTCCAAATTGTTCTGAAGGGACTCGGCGGCCTGACTGGCGCCAAGGTAGAGAGCTTCCTCGACAAAGGCATTCAAGGTTATCGTGAAC
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| DNA Sequence for Gene |
>EW80_RS02240
GTGAAGACCAAGCTTTCTGATTGTCTGCGCCCGGTGCTGCTGGGCGCGCTGTTCCTGGGTACGGCGGCCAACGCCGCCGTACAGTCCATCGATAAAGTGG TGGCGATCGTCGATAACGACGTGGTCATGCAGAGCCAACTGGACCAACGCGTTCACGAAGTTCAGCAGACCATCGCCAAGCGCGGTGGCGGTCTGCCGCC TCCAGGCGTGCTGGATCAACAAGTGCTCGAGCGTCTGATCGTCGAAAACCTGCAACTGCAGATCGGCGAACGTTCCGGCATCCGCATCACTGACGAAGAG TTGAACCAGGCTGTCGGCACCATTGCTCAGCGCAACAACATGAGTGTCGATCAGTTTCGTGCTGCGCTCGCTCGTGATGGCCTGAACTATGACGACGCCC GTGATCAGATCAAGCGCGAAATGATCATCAGCCGTGTGCGTCAGCGTCGTGTGGCCGAGCGCATCCAGGTGTCCGAGCAGGAAGTGAAGAACTTCCTCGC CTCCGACCTCGGCAAGATGCAACTGTCCGAAGAACTGCACCTGGCCAACATCCTGATTCCGACCCCGGAAAGCGCCGACTCTGAAGCGATTCAGAGCGCT TATCGTCAGGCCATGGATGTTTACCAGCAGCTCAAGCAAGGCGCTGACTTCGGTCAGATGGCCGTGGCCAAATCCGGCAGCGACAACGCGCTGGAGGGCG GCGAGATGGGCTGGCGTAAAGCCGCGCAACTGCCACCGCCGTTCGATCGTGAATTGAGCAGCATGGCCGTCGGCGACATCACTCAGCCTGCGCGTACACC GGGCGGCTTCATCATCCTGAAGCTACTGGGCAAACGTGGCGGCGAAGCGCAGATGCGCGACGAAGTGCATGTGCGTCATATCCTGGTCAAGCCGAGCCCG ATCCGCGACGAAGCCAAGACCAAGGCACTGGTGCAATCGTTGTATGACCGCATCACCGCCGGCGAAGACTTTGCCGAGCTGGCGAAAAACTACTCGGAAG ATCCGGGTTCCGCCCTCAACGGCGGCGACCTGAACTGGATCGACCCGAACGTGCTGGTACCGGAATTCCGCGAAGTGATGGCTTCGACCCCACAAGGTCA GCTGTCCAAGCCATTCCAGACCCAATACGGCTGGCACGTGCTGGAAGTCCTTGGCCGTCGCGCCACTGACGGCACCGAACAGGCCCGTGAGCAGCAAGCA ATGACTGTACTGCGTAACCGCAAATACGATGAAGAGCTGCAAACCTGGCTGCGTCAGATCCGTGACGAAGCATACGTAGAGATCAAACTCCCTGGTGCAG ACCAGGCAGCGCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACCCAAGCGTTTCGCGTTGACACCCGGCGAACCGGCCGGCATCGGTCCCGACCTGTGCCTGCTGCTCGCCTCGCAAGCCCAGCCACATCCCCTGATTGC CATCACCAGCCGCGACCTGCTCCTTGAGCGGGCCGCGCAGTTGGGGCTGGCCGTCAATCTGCTGGATGTCGCGCCGGGGCAGTGGCCAGATGTTCCAGCA CCGGCCAACAGCCTGTACGTCTGGGACACGCCGCTCAGCGCACCGGTAATCGCCGGGCAACTGGACAAGGCCAACGCTGCATTCGTCCTCGAAACCCTGA CCCGCGCCGGCAACGGCTGCCTGAATGGCGACTTCGCCGGGATGATCACCGCGCCGGTGCACAAAGGTGTGATCAACGAGTCGGGCATCGCGTTCTCTGG ACACACTGAATTTCTCGCCGACCTGACGCACACCGCGCAGGTAGTGATGATGCTGGCCACTCGCGGTTTGCGCGTGGCGCTGGTCACCACCCACCTGCCC
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| Amino Acid Sequence |
>molecular chaperone SurA
MKTKLSDCLRPVLLGALFLGTAANAAVQSIDKVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGLPPPGVLDQQVLERLIVENLQLQIGERSGIRITDEE LNQAVGTIAQRNNMSVDQFRAALARDGLNYDDARDQIKREMIISRVRQRRVAERIQVSEQEVKNFLASDLGKMQLSEELHLANILIPTPESADSEAIQSA YRQAMDVYQQLKQGADFGQMAVAKSGSDNALEGGEMGWRKAAQLPPPFDRELSSMAVGDITQPARTPGGFIILKLLGKRGGEAQMRDEVHVRHILVKPSP IRDEAKTKALVQSLYDRITAGEDFAELAKNYSEDPGSALNGGDLNWIDPNVLVPEFREVMASTPQGQLSKPFQTQYGWHVLEVLGRRATDGTEQAREQQA MTVLRNRKYDEELQTWLRQIRDEAYVEIKLPGADQAAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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