Pseudomonas sp. PTA1, EW80_RS23880

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PTA1 EW80DRAFT_scaffold00003.3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCACGTCACCGTCGGAGCAAAGCCTGCAGCAGTTGTACCGCGAGCATCGCGGCTGGCTGGAAACCTGGCTGCGCCGGCGCATGGGCAATGCGTGGGATG CGGCGGACCTCAGTCAAGACACCTTTGTCCGCGTCCTGTGCAACGCGCCGCCACTGGCTGAATTGCGCGAGCCGCGCGCGTATCTGCTCACCGTCGGCAA ACGGCTACTGAGCAATTTCTACACGCGGCGCCATCTGGAAAAAGCCTACCTCGATGCCTTGGCGCAATTGCCGGAAGCGTGCGCACCGTCGCCGGAGCAG CGCTGGTTGCTGCTGGAAACCTTGCAGGCGCTGGATGAATTGCTCGATGGCTTGCCACGTGCGGTGCGGCGGGCATTTCTTTGGAGTCAAATCGAGGGCC TTGGCTACCGCGAGATTGCCGAACGCTTGCAGGTTTCCGAGCGCACGGTGAAACGTTACATGGCCCAGGCGTACGAGCATTGTTTGCTGGTGGATCTCTG
DNA Sequence for Gene
>EW80_RS23880
ATGCGCGTTGCACCCAATGATGAAATGCGGGAAGTGGCGCGGGCAGCGGCGCAATGGCTGGCACTGCTCGAGTCCGGTGGTGCCAGTGATGAAGATCACG CCCGATTGCAGCATTGGCGCGCCAGTGACAGTCGCCACGAGAACGCTTGGCAGAAAATCCAGCAGCTTCGCCAGCGTTTCGCAGTTTTGCCGCCGACACT GGCCATGGCCACGCTGGATCGGCCGGATCCGGCGCGGCGCGCTGCTCTCAAGCGTGCCTTGGGCGTGGCGGCGCTGGTGCCGGCGGTGTGGTTGATCGGA CGCGAGCTGCCGCTGGAGGTGTGGCGCGCCGATTTGCACACCAGCACTGGCGAGCGGCGCAAAGTGCAGTTGGCCCAGGATTCGTCATTGCAACTCAACA CCGACAGCGCGGTGAATGTCGATCTGCCTGCACGTCAGCTGACGCTGATTCGTGGCGAGATGGCGCTCAACGTGGCGGGCGATTCAGCCTTTATCGTCAA CGCGCCTTATGGGCGGATGATCGTCAATCACAGCGACATCTCGGTGCGCCTCAATGCGCGCGATTGCCAGGTCTGCGTGCTGCGTGGTTCGGTGCAATTG CAGCCACTGCACGGCCCGACGCTGGTATTGCAGCAGGGCCAGCAAGTCAGCCTGCAAGCTTCGGGCGCGGGAGCGGTGACGGCGTTCGATGCGTTGATGC CCGGGTGGCGCGACGGTGTGGTGATGGCGCAAAACCAGCCGCTGGGTGATTTCCTCCGCGAGCTGAGTCGCTACCGCTCGGGCGTGCTGCGCTGGGATCC GGCGCTGGAATCGCTGCGCGTCACTGGCAGCTTTCGCCTCGACGATACCGATCAAGTGCTGGCACTGCTGGCTGCCAGTTTGCCCGTCGATGTGCATACG CGAACGCGATTTTGGGTGTCACTGGTACCGCGTGCAGAAAAAACCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCCTGTCCCTTTTTTTCGCCTCACTGGTCATTCCAGGCAAGTGAACAAAATCGAGAGCTTCTTCCAATGCCCGCAGTATTTCCAGGTCGTTTGCGTCCG TTGTTGCAGTTGAGCCTTTTGCTGAGCCTGAGTGCCAGCCCCGTGTTGATCCAATCGAGCTGGGCCGACGATGGCAGTCGCCGCAGTTATCAGGTGCCGG CCGGTAGCCTGAGTACAGCGCTGACGCGCTTCGCCGGTCTCGCCGGCGTCAATCTTTCGGTGGATCCGGCACTGGTCAGCGGCCGCAACAGCAATGGTTT GTCCGGTGAATATGGCGTGGAGGAGGGGTTCAGCCGGTTGTTGCTGGGTTCGGGTTTGCAGCTGCAACCGGTCGGCGATCAGGCTTATACGCTAGTGCCC GCAGCGCAAGGCAGCACCTTGCAGCTTGCGCCGACATCGATTCTCGGCGCGAGCGGTTCAGCGGATGCCGACGTGTTTGCTGGCGGTCAGGTTGCACGGC
Amino Acid Sequence
>sugar ABC transporter substrate-binding protein
MRVAPNDEMREVARAAAQWLALLESGGASDEDHARLQHWRASDSRHENAWQKIQQLRQRFAVLPPTLAMATLDRPDPARRAALKRALGVAALVPAVWLIG RELPLEVWRADLHTSTGERRKVQLAQDSSLQLNTDSAVNVDLPARQLTLIRGEMALNVAGDSAFIVNAPYGRMIVNHSDISVRLNARDCQVCVLRGSVQL QPLHGPTLVLQQGQQVSLQASGAGAVTAFDALMPGWRDGVVMAQNQPLGDFLRELSRYRSGVLRWDPALESLRVTGSFRLDDTDQVLALLAASLPVDVHT RTRFWVSLVPRAEKTG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site