Strain | Pseudomonas sp. PTA1 EW80DRAFT_scaffold00002.2_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATGCGCAGCGTCGACGGTCACAGCCTGCCGGTATCGAAGGTCTACCTCGATCAGATGGCGGCGGCGCAGACCATTCGCCAGAGTTTCTTCTCGATCAACC CGGCCGAGCCGACGGTGCAGTTCAAGCTTGAGCCCTACACCCTCGATCCGGCGGTCAGCCGCTCCGAATTCAAGTTCGGCGACAAGACCATGGAATACCG TCACGGCCCGATCCTGCCGATGACCTTCAAGTGGCCGACCGATGCTGAAGACGGTCGCACCAGTCTGGTCATGGACAAGATGGCCGGACGCCCGATCGGG ATCGAGAAGAACTCCGGCCCATGGTCGCTGTTCCGTCTGTTCGACCTGATGCAGACCGAGTATCTGAACGGTCGCGACGTGCTGGTACTGAAAGCCGACG TGGGCGGCCTGCGCGCCAACTACCTGCTGACCAGCCAGCGCACGCCAAACCCGTTCGACATGGGCGTGCTGCGCACCTTCCGTATGCCGGTGCAGCTCTG
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DNA Sequence for Gene |
>EW80_RS01705
ATGCTGGTGGCCAGTCCCTGGCGCAGCGCGGCGCGTACCGACCCGGGCAAGGTGCGGGCGCGCAACGAAGATGCCTTCCTCGATTCCCCGCAGCATGGGC TGTGGGTGGTCGCGGACGGCATGGGCGGTCATCAGGGTGGCGACATCGCCAGCCAGTTGATCGTCGCCAGCCTGGCTGAGTTGCCGCAACATGAGGATTT CGACGAACGCCTCAAAGCCATCCGCCAGTGCCTGCACTGGCTGAACCGGCGCTTGGGGCAGGAGTTGACCGTCACCGCCGGACGCCACGACAGCATCATG GGCAGCACCGTCGTCGCGCTGCTGGTGGAAGGCAATCGCGCGGCCTGCATCTGGGCCGGCGACAGCCGTTGCTATATGTGGCGCGGGCAGCGGCTGTATC AGCTGTCCAAGGACCATTCGCTGCAACAGCAACTGATCGACGAGCAGCAAATGAGCGTCGAACAGGCGGCAGCGCACCCGGCGGCTCAGGCACTCACCCG AGCCGTCGGCGCCGCCGACACACTGACCCTGGATGTGCTTGAACTCGAGGTCTATCCGGGCGATGTGTTTTTGCTCTGCAGCGATGGTTTGTATCAGGGC CTGAGCAGCGATGCCCTCGGCAACGCCCTCAGCCTCAGCGCGCCGCACGTGGCGCTGGAACGTTTGTTCGACGGCGCCCTGCGTGGCGCTGCGCGCGACA ACCTGACTGCCGTGGTGATCCGCCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTGAACTCGAATCGCCCATCGATGACTTGCTGATCAGCGACGAGCAGGCCAACAACCTGACCTACTTCGCCTTCGCCAAGGGCAACAAGGCCGAACCGTT GCTGGCGCCTACCAAGGCCAGCATCGGTGCGCTGCCGGATGTACTCGCCGGTCGCTACCACCTCGAGCGTCTGCTCGGGGCCGGTGGCATGGGCGCCGTT TACCGGGCGCGGGATCTGCTGCACGAGCAGTTCGGCGATCCCGACCCTTACATTGCGCTGAAAATCCTCAGCGAAGAATTTGCCGAATCGCCGGACGCCA GTGCCTTGCTCTACAGCGAGTTCGCCCTGACCCGACGCCTGCGCCACGACAACGTCGTGCGTGCGCACACCTTTGAAGTCGACACCGATTGCCAGCGGGC CTTCATCACCATGGAATACATGCGTGGCCTGACCCTGGACAAATTGCTTTGCGAGCGGCCCCTCGGCCTGCCGTGGCATGAACTGCGCGACATCGTCCTG
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Amino Acid Sequence |
>protein phosphatase
MLVASPWRSAARTDPGKVRARNEDAFLDSPQHGLWVVADGMGGHQGGDIASQLIVASLAELPQHEDFDERLKAIRQCLHWLNRRLGQELTVTAGRHDSIM GSTVVALLVEGNRAACIWAGDSRCYMWRGQRLYQLSKDHSLQQQLIDEQQMSVEQAAAHPAAQALTRAVGAADTLTLDVLELEVYPGDVFLLCSDGLYQG LSSDALGNALSLSAPHVALERLFDGALRGAARDNLTAVVIRQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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