Pseudomonas sp. PTA1, EW80_RS01355

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PTA1 EW80DRAFT_scaffold00002.2_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCCCAGCAACTGCTCGATGCGATGGCGCATCTCCGCAGCGGCCTTGTTGGTGAAGGTCACCGACAGGATGGAGTGAGGCGAGGCGTTTTCGACCTGGAT CAACCAGGCGATACGGTGCACCAGCACTCGGGTTTTACCGGAACCGGCGCCGGCCAGGACCAACTGACGGCCAACGGGGGCTGCTACGGCCTGGCGTTGG GCATCGTTGAGGGAGTTCAGCAGAAGGGAGAGATCATCGCGCATCGGGGCATTCTAGGGTGCGCCGCAGGCCCGGGCAAACCGCGCGTTGCATTAGCCGA TGAAAGTGCTGCCGATGACGACCGGTCGGTCACTGGCTGCAGGCTTCGGCCCGTCTCGCCTGAGGGGTTGCAGCGGTGCGCAAGCGGCGGAAAATTTCCC CGCAATTGTGATCGGCAGCAGTTTGGCATCGGGATCGGCTTGTGTATGCTCCGTCCACGTTTCGGGCGCACGCCCTCCTATAAGAACAAGAACGTTGCCC
DNA Sequence for Gene
>EW80_RS01355
ATGATCCTCAGCGCCGAACTGTCGGGGCCCTCCGTGGACCCCCGGGTGATCCGCAAGCACTATGCCGTCGAAATGGCGGTAGAGCGCACGCGTCTGCTGT ATCAGGGCTCGTTGTTGCCCACGCTGTTCATGTTGATCAATGGTCTGGTCTGCGCCGCTTTGCTCTGGAGCCCGCAGCGCTACTTCGTGGTCAGCGTCTG GCTGGTGTGGCTGCTGTCGCTGGTCGCGCTGCGGGTGATTCAGGTGGCCGCGTTCGATTCGGCGATTCCCGATCGTCAGGCCCAGCCAATCTGGTTCCGC ATGTTCCTGCTCGGTTCGACCATGACCGGCCTGACCCTGGCCGGAGCCGGCATCGCTCTGGTGCCCGCTGACAACTTCATGCAGCAAGCCTGGGTATTCG GTCTGATCGGCGCGGCAACGCTGTCGGCCAGTGTCGCCTACGCGGTGAGCCTGCCGGCGTTCCTCTCGTTTACCTTACCTTGCCTGCTGCCAGCGATCGG CTACCTGTTCTGGGGCGGCGACGATCAGGCGCGGGGCTGGGGCTGGCTGGGGCTGATCCTGCTCGGTTCGCTGAGCGTGGTGGCGTGGCAGGTCAATCGG CTGATCGACCGTGGATTGCTGCGGCGCTTCCAGAATCAGCACTTGATCGAGCATTTGCAGCAAGCACAAACGCGCAGCGAACAACTCAATCAGGAGCTGG GCAAAGAGATCGAGCAGCGCCGCTGTGCCGAGGCGCAATTGCGTGAAGCGCAGGTCGATCTGGAAGATCGCGTGGCCCAGCGCAGCCGCGAACTGGATGC CGCCAATCAGGCCCTGAGCAAAAGCGAAGCGCGCCTGGCGCTTGCGCTCAAGGCCAGTGAGCTCGGATTGTGGGACTGGAACCTGCAGACCGACGAGGTC CATCACACGCAGATTCAGGAACTGTTCGGCCTCGCTCCGGAGTACGTCACGGCGCTGCTGCGCGACCTCAAGCCACGACTGCACCCCGAAGACGTGCCGT CACTCAAGTTCGCCCTGGTCGAGCATTTGAAGGGGCGCACCGAGGATTATCAGGTTGAGTATCGCCTGCGCCACGGCGACGGCCACTGGGTGTGGATCGA GGACCGTGGCCGCGCCGTAGAGCGCAGCGCCAGCGGCCGGGTGATCCGCATGGTCGGCACTCGCCGCGATATCAGCGCCAGCAAAAGCCTTGAAGAGCAG CAGCGGCTGGCGGCCACGGTGTTCGAAGCGGCCAGCGAGGGCATCGTGATTCTCGACCCGAACTACGCGCTGATTGCGATCAACCAGGCGTTCAGCCGGG TCACCGGTTACGAGATCGACGACATGCTCGGGCGCAACGTCGTCGAGTTGCCCTGCAGCCGCGATGCCCATCGCCACTATGTGGCGATCCGTCATGCGCT GGATCAGCACGGCAGTTGGCAGGGCGAACTGGTGGAGACGCGCAAGAACGGCGAGCTGTATCCGCAGTGGTTGCAGCTCAACGCGGTGCGCGACAGCCGG GGCAATGTCAGCCATATTGTCGGCTTCTTCGCCGATCTCTCGGCACGGCGTGCGTCGGAAGAACGCCTGCGTTATCTGACCCATTACGATGAGCTCACCG GCCTGGCCAACCGTTCGCTGTTCCGCGAACGTCTGCACGAAGCCCATCAGCGCGTGCGGCAGGGCGGGCGCCGCAGTCTGGCGTTGCTGCACATCAATCT CGATCGCTTCAAATTGCTCAATGACAGCCTCGGCCATGAAGTCGCCGATCAGCTCCTGCAGAAGATGGCCCGGCGGCTGGTCAATGCCTTGCCGGAAGCC GACACCATTGCGCGCCTGTCCGGTGACGAATTTGCCGTGCTGTTCGATGCCTACGGCAATCTGTCGAGCCTGGCACGGGTAGCGACGCGGTTGTCGGCCA AGCTGCGTTTGCCGCTGAGCGTCGACGGGCATGAACTGGTGGTCAGCGCTTCGATGGGCATCAGCCTGCTGCCGGACAACGCGCGGGAGATTTCCGCGCT GGTCAGCCAGTCGAACATGGCCATGCAGCATGCCAAACATCTGGGCGGCAACAATTTCCAGTTCTTCACCGACAGCCTGCAAGCCAGCACACTCGAACGC TTGCAGCTGGAAAACCACTTGCGCCGAGCCATTGAAGAACAGCAACTGACAGTGTTCTACCAACCGAAACTGTGCCTGCAAACCGGCCGGATGAATGCCG CTGAAGCGCTGGTGCGCTGGGATCATCCGAGCATGGGCCAGGTGCCGCCGGCAGATTTCATTGGCCTGGCCGAAGAGACCGGTCTGATCGGGCCGATCGG CGAATTCGTTTTGCGTCAGGCGTGCTGGCAAGCCTGCGAATGGCAACGCCAGGGCCTGGCGCCGATCCGCGTGTCGGTGAACCTGTCGGTGCATCAGCTG CGTCAGGGCAAACTGGTCAGTCTGGTCCGGCAAGTGCTGGAAGAAACCGGGCTGGCGCCGCACTACCTCGAGCTGGAGCTGACCGAGAGCCATTTGCTCG ACAGCGTCGAACACATCATTGCGACCTTCCAGCAACTGCGCGATCTGGGGGTGAAACTGGCGATCGATGATTTCGGTACCGGGTATTCGTCGTTGAGTTA CCTCAAGCGCATTCCGGTGGATTACGTGAAGATCGATCAGGCGTTCATTCGCGGCTTGAGCGAGGGCAGTGCGGACGCGGCGATCACTCGCGCGATTATC GCCATGGCCCACGGACTGGCCCTGAAAGTCGTGGCCGAAGGCGTCGAGCGGCAGGATCAGCTGGAATTTCTGCGCATGGAACGCTGCGACGAAGTGCAAG GTTATCTGATCAGCCGGCCGGTGGACGCTGCCCGTCTGGCCGGGCTTTTGCGTGATCAGGCAAATCCGCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGGCTACATGCACCGCAGCGTGTCTGATGCCGGGACATCGAGTTACGCATTGAGCAGGCAAAATGCCCATTCATGTAGTATAACTACAAGCTTGCTACAT CCTTGCCCACAAGAAGAGTCCAGCCCCTTGAATCTGCTGCAACACATTGCCCAGTCACGTCACCTGTTACGCAAGTCGGAGCTCAAGGTCGCCGACCACG TGCTGCTTGACCCTGCGGCGGTGATGCACAGTTCCATGGCCGACCTGGCTCACAGCGTGGGTATCAGCGAGCCGACCATCGTGCGCTTCTGCCGCGCCAT CGGTTGTTCCGGCTTTCAGGATCTCAAGCTGAAACTGGCGCAAAGCCTGGCCGCCGGCGCCAGCTTCGGCCAGTTCGCGATCCACGAAGATGACTCCGTC GCCGACTACAGCCTGAAGATTTTCGACACCACGCTGCACACCTTGATGGAAGTGCGCGAGAAGCTCGATCCAGTGGAGCTGCAGCGCGCGGTGACGCTGA
Amino Acid Sequence
>diguanylate cyclase
MILSAELSGPSVDPRVIRKHYAVEMAVERTRLLYQGSLLPTLFMLINGLVCAALLWSPQRYFVVSVWLVWLLSLVALRVIQVAAFDSAIPDRQAQPIWFR MFLLGSTMTGLTLAGAGIALVPADNFMQQAWVFGLIGAATLSASVAYAVSLPAFLSFTLPCLLPAIGYLFWGGDDQARGWGWLGLILLGSLSVVAWQVNR LIDRGLLRRFQNQHLIEHLQQAQTRSEQLNQELGKEIEQRRCAEAQLREAQVDLEDRVAQRSRELDAANQALSKSEARLALALKASELGLWDWNLQTDEV HHTQIQELFGLAPEYVTALLRDLKPRLHPEDVPSLKFALVEHLKGRTEDYQVEYRLRHGDGHWVWIEDRGRAVERSASGRVIRMVGTRRDISASKSLEEQ QRLAATVFEAASEGIVILDPNYALIAINQAFSRVTGYEIDDMLGRNVVELPCSRDAHRHYVAIRHALDQHGSWQGELVETRKNGELYPQWLQLNAVRDSR GNVSHIVGFFADLSARRASEERLRYLTHYDELTGLANRSLFRERLHEAHQRVRQGGRRSLALLHINLDRFKLLNDSLGHEVADQLLQKMARRLVNALPEA DTIARLSGDEFAVLFDAYGNLSSLARVATRLSAKLRLPLSVDGHELVVSASMGISLLPDNAREISALVSQSNMAMQHAKHLGGNNFQFFTDSLQASTLER LQLENHLRRAIEEQQLTVFYQPKLCLQTGRMNAAEALVRWDHPSMGQVPPADFIGLAEETGLIGPIGEFVLRQACWQACEWQRQGLAPIRVSVNLSVHQL RQGKLVSLVRQVLEETGLAPHYLELELTESHLLDSVEHIIATFQQLRDLGVKLAIDDFGTGYSSLSYLKRIPVDYVKIDQAFIRGLSEGSADAAITRAII AMAHGLALKVVAEGVERQDQLEFLRMERCDEVQGYLISRPVDAARLAGLLRDQANPQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site