Pseudomonas sp. PTA1, EW80_RS00475

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PTA1 EW80DRAFT_scaffold00002.2_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAGCAACTTCCCCCGGCGCAATCGCATCATCAGCGGGTTATCCCTTGGCGTGCTGGTGGTCGAGGCCAGTGTTGCCAGCGGTTCGTTGATTACCGCGCGG CTGGCGGCAGAGCAAGGGCGCGAGGTTTATGCCATTCCGGGCTCTATCCATCACCCCGGCGCGCGCGGTTGTCATCAGTTGATTCGCGACGGGGCGGTGT TGGTGGAGACTATTGAACATATCCTCGAAGCGCTGCGCGGCTGGCAGCAACCGTTGTTATCCACAGCGCCGCCGCAGGCCGATCACCCGTTGCTGGCGCT GCTTCACGCCGCGCCGCACACCAGCGAGGCGTTGGCCGCGAGCTGTGGCTGGGCGTTGCCGAAAGTGCTGGCAACGTTGACCGAGCTGGAAATCGAAGGC CGTGCGGTATGCGAAAACGGTCGCTGGCTGGCGCGGTCGAGCTAGGTTTTACGATGAAGATCGGTAAACTGCGCGAAACCTGTTTGTGGAGAGTTTTTTC
DNA Sequence for Gene
>EW80_RS00475
ATGGTCAACAGTTGGCGTGTGCAACAAGCCGCGCGTGAAGTTCGCGCCGGCGCGGTGATTGCCTATCCAACCGAAGCCGTCTGGGGGCTGGGTTGCGACC CGTGGAATGAAGACGCGGTGGACCGCTTGCTGGCGATCAAGAATCGCTCGGTGAGCAAAGGGCTGATCCTGGTCGCCGACAATATCCGCCAGTTCGATTT CCTCTTCGAGGACTTCCCGCAGGACTGGATCGACCGCATGGCCAGCACCTGGCCGGGGCCGAACACCTGGCTGGTGCCGCATCAGAACCTGTTGCCGGAA TGGGTCACAGGCGTGCATGACACCGTGGCGCTGCGAGTCAGCGATCACCCGCAGGTGCGCGACTTGTGCTCGCTGGTCGGGCCGCTGATCTCGACATCGG CCAATCCACAGGGGCGACCGCCGGCGCGCACGCGTTTGCGCATCGAGCAGTATTTCCGTGGGCAGGTCGATCTGGTGCTCGGCGGCAGCCTTGGCGGGCG CAAGAACCCCAGTGTGATCCGCGACCTGGCCACCGGTAACGTCGTTCGTCCTGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCCATTCTTTTTATTTTTTGCGGACTCCTCGGCGCTATTGACGAGGAGTTTTGCGCATGCCCGCAGTTTATTCCTGCACTCGTTTAAAACTTATCCGTT GCCATTGTTCTTGCATGCGTCAGACGGTTCTTCGACTCTGCAATATCTGTAAGTTTTCCCACGCGATTATCAGAACGCGTGCAGTGGCGAGATTTTCAAA AGCATCCATTCTTTCAATGTGCTTGATACAACTTCGAAATGTTAATGGCTGCGGAGAAGTAATGGATATTACGGATTTACACCTCAAGGATTATCTGCAG GGCTTTCAGGAGACACTCAAGAATCAACAGGCCGACTATCGTGTGGCCATTCTTGAGGCGGGGTCGGACGCCGGAGAATTCGAGCGTTTCATTGGTCGGC AGTTTCGCCTGCGATTGCAGCATTACATGCTCACTTCCAGAGCCCGGGCGCTGGAAACCCGTTTGGCGATCACCTCGCGCAGTACGCACTTCTTGCTCTA
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MVNSWRVQQAAREVRAGAVIAYPTEAVWGLGCDPWNEDAVDRLLAIKNRSVSKGLILVADNIRQFDFLFEDFPQDWIDRMASTWPGPNTWLVPHQNLLPE WVTGVHDTVALRVSDHPQVRDLCSLVGPLISTSANPQGRPPARTRLRIEQYFRGQVDLVLGGSLGGRKNPSVIRDLATGNVVRPD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site