Pseudomonas sp. PTA1, EW80_RS00085
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PTA1 EW80DRAFT_scaffold00002.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGGTCGGATTGAATGAGGCGGGCATCGGGTCATCCACCCGATGCGCTCACCTTGTAGCGCTTTGCCATTCCCTATGGCACTCGGCCAGCGCGCAAGTT CAGAAGACTAGCTCAAACTCAGCTGGCGGCAATCTTGAAGCCGACTTTCAGCGTTACCTGAAAGTGCGCCACCTGGCCGTTTTCGATGTGGCCACGGGTT TCGGTCACTTCAAACCATTCCAGATTGCGCAGGGTTTTGTTGGCTTCGGCCAGTGCGTTGTTGATGGCGTCTTCGATGCTGGTGGTGGACGAACCGACCA GCTCGACTTTCTTGTACGTGTGATGCTCACTCATGGCGTTCTCCTTGGGTTGGAATGGCGTGTGAAATTGAGCCTAGCAGGCAATTGCACTGTTGATTTC GGCGCCTCTGCGCTGCCGAAGTTCAGAATTTCTGCACTTTCTCGAAGTGGTGAAGTCCCAACCAACACACGCCACTCATCACCAATGCAGGAGAGCCACC
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| DNA Sequence for Gene |
>EW80_RS00085
ATGGCCAACACCTCTTTACGTAAAGCCTCGTTGCAAAGCATGGAAGCCGAGATCGAGAGTCTGCTCAAATCGTTGGAAAGCTTGAAAGACGATGCTTCGG ACGAGTCGCGCAAGACCCTCAAGGCGCTGAAAAGCAATGCCGAAAGTGCACTGAAACATTCCCGTCATCTGCTCAGCGACGCGTACGAAGAAGTCAAAGT GAAAACCCGCGAGACCGGCATTGCCACTCGTGACTATGCGCAGGAACACCCATGGACCACGGCTGGCGTGGCTGTCGGTGCAATCGGTCTGCTCGCTGCC TACTTTTTGTTCAAGCGCGGTGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCAGGCTGGCGCAGCTCGTTTTTGAGCCACTGCGCCAGTTGCCGGGCGCGCCCGTCCGCGGCGCGCTTGGGTAGCCACAACGCCAGTTGCGCCGGGGTTT CGCAGAAGCCCCATGGCGCAACCAGGCGTCCTGCCTTCAGATCTTCCATTACCAACGGCTCCGGTGCGATTGCCACGCCGAGACCTGCAACAGCCGCCTC CAGCAAATAATACAAATGCTCAAAACCTTGCCCGAGCTTCAACGCCTTGGGATCGAGGTGGTTTTGCTGCGCCCAGCTGGGCCAGGCTTGTGGGCGAGAG GTGGTGTGCAGCAAGGGCTGCTTGAGCAATTCTGCGCCAGGAGCGTCGTGCAGGTTCTGATAACCGCTGAATAACGGGCTCATCACCGGGCCGATGCGTT CTGCCGCCAGCTCGTAGACCTGCATATCGGCCGGCCACGGTGGCTCGGCGAACAGCAACAGCGCATCAAGGCCCGGGCGCCGAGGGTCGAGATCGCCTTC
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| Amino Acid Sequence |
>hypothetical protein
MANTSLRKASLQSMEAEIESLLKSLESLKDDASDESRKTLKALKSNAESALKHSRHLLSDAYEEVKVKTRETGIATRDYAQEHPWTTAGVAVGAIGLLAA YFLFKRGE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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