Pseudomonas sp. PTA1, EW80_RS21085
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PTA1 EW80DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGATCGTCATGCTGTTCGACGAACCGACCTCGGCGCTCGACCCGGAAATGGTCAACGAAGTGCTCGACGTGATGGTGCAACTGGCCCACGAAGGCATGAC CATGATGTGCGTAACCCACGAAATGGGCTTCGCCCGTAAAGTCGCCGACCGGGTGATCTTCATGGACCAGGGCAAGATCATCGAAGACTGCCCGAAAGAG GAATTCTTCGGCGACATCAGCGCCCGCTCCGAACGCGCGCAGCACTTCCTCGAGAAAATCCTGCAGCACTAAAAGCAACACACCCGCACCCTGTCTGTGG GGTGCGGGCAGCCTGACAATGAGATCCCCTGTGGCGAGGGGATTTATCCCCGTCCGGCTGCGCAGCAGTCGTAAAACCTGTGCATGCGGTCTTTCAGTTA AACCGCAGTGATGGTTTTGGGGCCGCTTCGCGGCCCAACGGGGATAAATCCCCTCGCCACAGGCACAAACAAGTGTTGTGGTTGACCCAAGGCATCTGTG
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| DNA Sequence for Gene |
>EW80_RS21085
ATGAAATGCGACCCCACTCTTTATCGCGCTGCCGAGCCATCACTTGCCGTGAAGCCCCGTCTGATCCGTCATCTGTTCCTGCCGCCACTGATCATCGCCC TGATGGTCGGGCTGGGTTTCATCGGCTTCTGGACCAGTGAACACTTCGGCATCCGCAGCCTCGGCGAGAACGGTCAGCGTCAGTTGGAACTGCACGCCCG CGCGGTCGAAAGCGAGATCAGCAAATACACCTACCTGCCCAGTCTGCTGGAACTCGAAACCAGTGTGCCGCAGTTGCTGGCCGATCCGACCCCGGAGCAC CGGCAGACGGTCAACGACTACCTCGAAGGCCTGAACCGCCGCAGCCGCAGCCGGGCCATCTACGTCATGGACACCACCGGCCGGGTCATGGCCACCAGCA ACTGGCGCGATGTCGACAGTTACCTGGGTGAGGACCTGTCCTTCCGCGCCTATTTCAAAGACGCCGTACGCGGCCAGCCCGGACGCTTCTACGGCATTGG CAGCACCAATGGCGAACCTGGTTACTACCTCGCCCACGGCCTCGAAGAGCACGGCAAGATCATCGGTGTCGCGGTGGTCAAGGTGCGTCTGGAAGCCATG GAAGAGCGCTGGCAGCGGGCGCGTCTGGAAGCGTTCGTTAGCGATGAGAACGGCATCATCATTCTCTCCAGCGATCCGGCCAGGCGGTTGAAATCGGTGA TCCCGCTCAGCGATGAGATCAAGGAAAAACTCGCCCGCAGCCTGCAGTATTACTGGTTCCCGCTCAACGAACTGCAACCGCTGGCCCGCGAGACGCTGGC CGAAGGCGTGGAGAAACTGACTTTCCCGGCCAACAGCGAATTGCAGCCCGACGAAGACGACATCAGTTATCTGGCGCAAACCCGACTGCTGAGCGACACG CCGTGGAATTTCACCCTGCTCACGCCATTGCAGGACCTGCGCCGCGAAGCCATCAACCAAGGCATTCTGGTGGCCGTTGCGTTTGCCCTGTTCGCCTTCC TGCTGATTGCCTGGAACGAGCGGCGCAAAGTCCTCGCCACCCGCCTCGCCGCCCGCGAAGCGTTGCAGGAAGCCAACAGCCAACTGGAGCGTCGGATTAC CGAACGCACCGCCGATCTGCGCGCCAGCAACGAACGCCTGAAGAGTCAGATCCGCGAACGCCGCCAGGCCGAGGAGACGTTGCGCCGCGCTCAGGATGAA CTGGTTCAGGCGGGCAAACTCGCGGCCATCGGCCAGATGTCGACCAGCATCGCCCATGAATTGAACCAGCCGCTGGCGGCGATGCGCACGCTGTCGGGCA ACACCGTGCGCTTTCTCGAGCGCGGCCAGCTCGACGTCGCCAGCACCAACCTCAAGACCATCAACGACCTGATCGACCGCATGGGCCGGATCACCGCCAG CCTGCGTTCGTTCGCCCGGCGCGGCGACAACAAGGGTCAGGCCAGTCTCGGCAAAGCCGTCGACGCCGCCTTGCAAGTGCTCGGCGCGCGCGTGGAAAAC ACCGCGCTGCAGATTCACCGGCAGTTTGCCGATGTGCAGCTGCTGATCGATCAGACCCGCCTCGAACAGATCCTCGTCAACCTGATCGGCAACGCCCTCG ACGCCATGCACGCGCAACCGCAGCCGCAGCTGTGGCTGGAGGGTGAAGAATTCAACGGCAAGTACCGCTTGCGGGTGCGTGACAACGGCCACGGTATCGA CGCCGAAGCGCGCAAGCATCTGTTCGAACCGTTCTTCACCACCAAGCCCGGCGAGCAAGGCCTGGGACTGGGCCTGACCCTGTCCGCCAGCCTCGCCGCC GCCACCGGCGGGCACCTGGGTGTCGAACACCCGGCCGGCGGTGGCACCACTTTCGTCCTCAGTTTACCGTTGGTAAGCCCTCTTTCTGCCGAGCCAATAT GA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCCTGAACTCAGTGTGCTGATTGTCGAAGACGACCCCCATGTGCTGCTCGGCTGCCAACAGGCGCTGACCCTCGAAGACATTCCGTGCATCGGCGTCGG CAGTGCCGAAGAGGCGCTGGCGCAGGTCGGCGACAACTTTGCCGGCATCGTCATCAGCGACATCCGCCTGCCGGGCATCGATGGCCTGGAATTGCTCACC CGCCTCAAGCAGCGTGATCGCAGCCTGCCGGTAGTGCTGATCACCGGCCACGGCGACATTTCCATGGCTGTCGGCGCGATGCAGAAAGGCGCCTACGATT TCATGGAAAAACCGTTCTCGCCGGAACGCCTGGTCGATGTCGCGCGGCGGGCGCTGGAGCAACGCAGCCTCGCCCGTGAAGTCTCATCACTACGTCGACA ACTGGCTGAACGCGACTCCCTTGAAGGGCGGATCATCGGCCGCTCACCAGCGATGCAGAATCTGCGCGAACTGATCGCCAACGTCGCCGACACTTCGGCC
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| Amino Acid Sequence |
>histidine kinase
MKCDPTLYRAAEPSLAVKPRLIRHLFLPPLIIALMVGLGFIGFWTSEHFGIRSLGENGQRQLELHARAVESEISKYTYLPSLLELETSVPQLLADPTPEH RQTVNDYLEGLNRRSRSRAIYVMDTTGRVMATSNWRDVDSYLGEDLSFRAYFKDAVRGQPGRFYGIGSTNGEPGYYLAHGLEEHGKIIGVAVVKVRLEAM EERWQRARLEAFVSDENGIIILSSDPARRLKSVIPLSDEIKEKLARSLQYYWFPLNELQPLARETLAEGVEKLTFPANSELQPDEDDISYLAQTRLLSDT PWNFTLLTPLQDLRREAINQGILVAVAFALFAFLLIAWNERRKVLATRLAAREALQEANSQLERRITERTADLRASNERLKSQIRERRQAEETLRRAQDE LVQAGKLAAIGQMSTSIAHELNQPLAAMRTLSGNTVRFLERGQLDVASTNLKTINDLIDRMGRITASLRSFARRGDNKGQASLGKAVDAALQVLGARVEN TALQIHRQFADVQLLIDQTRLEQILVNLIGNALDAMHAQPQPQLWLEGEEFNGKYRLRVRDNGHGIDAEARKHLFEPFFTTKPGEQGLGLGLTLSASLAA ATGGHLGVEHPAGGGTTFVLSLPLVSPLSAEPI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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