Pseudomonas sp. MT-1, MT1_RS18425
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MT-1. [Details] | |
| DNA Sequence Upstream of Gene |
TCGAGGAGCTGGTGACCGTCCGCAATCAGGGCGATCAGCTGGTTCATGCGACCCGCAAGATGCTGACTGAAGCCGGCGACAAGGCCACCGAAGAAGATAA GGCCAACATCGAAAAAGCCATCGGCGAGCTGGAAGTTGCCATCAAGGGCGACGACAAGGCTGAGATCGAAGCCAAGATCGCGGCGGTCTCTCAGGCCTCC ACACCCCTGGCGCAGAAGATGTATGCCGAGCAGCCTCAAGGCGGCGAAGCCGAACAGGGTGGCGACAGCGGACAGTCCGGTGACGACGTGGTCGATGCTG AGTTCGAAGAGGTCAAGGACAACAAGTAAGCCGCGGCTTATGACCTCCATGAGTGGAGAGAGCGCAGAGGCCTGCATTGTGGCCGCTGCCTTTTGCTCCA GCCCCATGCGGTGATGCCGCGACGGGTCTAATCGCCGCGCGGGGGCTTGCTCCCGCGTCGGCGTGTCTGGAGGGTACGAATTTGAAGGTTCAGGAAACTT
|
|
| DNA Sequence for Gene |
>MT1_RS18425
ATGGCCAAACGTGACTATTACGAAGTGCTGGGTGTCGAGCGCGGCGCCAGCGAGGCAGAGTTAAAAAAGGCTTATCGTCGCCTCGCAATGAAGCATCATC CGGATCGTAACCCCGGAGACAAAGCCGCCGAAGATGCATTCAAGGAAGCCAATGAGGCTTACGAGGTGCTGTCCGATGCGAGTAAGCGTCAGGCCTATGA CCAATATGGTCATGCTGGTGTCGATCCGCAGATGGGGGCTGGCGCGGGCGCGGCGTACGGTAACGCCAACTTCTCCGACATCTTCGGCGACGTGTTCAGC GATTTCTTCGCTGGCGGACGGGGCAGTTCGCGTGGCGGTGCTCAGCGCGGCAGTGATCTACGCTACACCCTCGAGCTGGATCTGGAAGAGGCTGTGCGCG GCACCACGGTTACGATTCGAGTGCCGACGCTTGTCGAGTGCAAGACCTGCGACGGTTCCGGCGCCAAGAAGGGCACCAGCCCGGTGACCTGTACCACCTG TGGCGGCATCGGCCAGGTGCGCATGCAACAAGGGTTCTTCTCGGTGCAGCAGACCTGCCCGCGCTGTCATGGCAGCGGCAAGATGATTTCCGATCCTTGC GGCAGCTGCCACGGGCAAGGGCGCGTCGAAGAGCAGAAGACACTTTCAGTCAAAGTGCCGCCGGGTGTCGACACAGGTGACCGGATTCGTTTGACGGGTG AGGGCGAAGCGGGCGCTCAAGGCGGTCCGGCTGGAGATCTTTATGTGGTGGTCAACGTCCGCGAGCACCCAATCTTTCAGCGTGACGGCAAGCACCTGTT TTGCGAGGTGCCGATCAGTTTCGCTGATGCGGCGCTGGGTGGCGAGTTGGAAGTGCCCACCCTCGACGGGCGTGTGAAGTTGAAAATTCCGGAAGGCACT CAGACCGGTAAGCAGTTCCGTTTGCGTGGTAAGGGTGTCGCCCCTGTACGTGGCGGTGCCGCCGGCGATCTACTATGCCGGGTGGCGGTGGAGACGCCGG TTAACCTGGGCAAGCGCCAGCGCGAAATACTCGACGAGTTCCGCAAAACATTGCAGAGCGACAGCTCTCATTCGCCAAAAGCCAGCGGCTGGTTCGAAGG CGTGAAGCGATTTTTTGGCGATCTTTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCAGCGGCGAGCTGCAGGCGGCAGCCTTCCTGAAGGCGTCCTTGCAGCTTAAGGCTTGCAGCTTGGAGCTGTTTTTATGCGACGTATTGCAGTAACGGG CGCCGCGGGGCGTATGGGCAAGACGCTGGTCGAGGCTGTTCAGCAAACCTCTGGTGCTGCGGGCTTGACCGCGGCTATTGACCGGCCAGATAGCACCCTC GTGGGCGCTGATGCAGGCGAGCTGGCTGCTATCGGGCGGCTCGGCGTACCGCTGATCGGCGAGGTGGCGAAGGTCGTCGACGAGTTCGATGTGCTGATCG ATTTTACTCATCCTTCGGTCACGCTGAAGAACCTTGAAGTGTGCCGACGCGCCGGCAAGGCAATGGTGATCGGCACCACTGGTTTCTCGGTTGCAGAGAA GGAAAAACTGGCAGCTGCAGCACAGGATATCCCCATCGTGTTTGCCGCGAATTTCAGCGTCGGCGTCAACTTGTGCCTGAAGCTGCTTGATACGGCTGCG
|
|
| Amino Acid Sequence |
>molecular chaperone DnaJ
MAKRDYYEVLGVERGASEAELKKAYRRLAMKHHPDRNPGDKAAEDAFKEANEAYEVLSDASKRQAYDQYGHAGVDPQMGAGAGAAYGNANFSDIFGDVFS DFFAGGRGSSRGGAQRGSDLRYTLELDLEEAVRGTTVTIRVPTLVECKTCDGSGAKKGTSPVTCTTCGGIGQVRMQQGFFSVQQTCPRCHGSGKMISDPC GSCHGQGRVEEQKTLSVKVPPGVDTGDRIRLTGEGEAGAQGGPAGDLYVVVNVREHPIFQRDGKHLFCEVPISFADAALGGELEVPTLDGRVKLKIPEGT QTGKQFRLRGKGVAPVRGGAAGDLLCRVAVETPVNLGKRQREILDEFRKTLQSDSSHSPKASGWFEGVKRFFGDL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|