Pseudomonas sp. MT-1, MT1_RS17775
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MT-1. [Details] | |
| DNA Sequence Upstream of Gene |
GCCAACCACTCTCGCTCCTGATGCTCGACGTTGATCGCTTCAAAGAATACAACGACAAACTTGGGCATCTGGCGGGTGATCATGCGCTCTGCCTGGTGGT CAACACACTCGGCAAACTGCTGCGCCCAGCCGACAGCCTGGTGCGCTATGGTGGCGAAGAATTCGTGGTGCTGCTGCCCGAGATGACCATCGAAGATGCG CGAAACGTTGCAGAACGGCTACGTCGCAGCCTTGAAGATGTCGCCTCGTTCCATTCGCCCATCGGCTTACTGCCGGGCGTGACCATCTCGATTGGCGTAG CACCGATGCGGTTGAACGATGATCTGGACAGCCTCATCAACGTGGCTGATCGCGCGCTCTACCGAGCCAAGGAACAGGGCCGAAATCGCGTCTGCGGGTG AAACAGCGCTGCGACCGACCATCCCTGAGCAAGTCTTCGCCGTATCTGCTTCTTGCATTACACTGGCGAGCAAACCTTACAAGACAAAGACGAGAAGACC
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| DNA Sequence for Gene |
>MT1_RS17775
GTGCTCAAAGCACTAAAGAAGATGTTTGGCAAAGGCTCGAATCAGCCTGCGACCACCGAAGCTGAAAGCAGCACCTCAATACACCAGGGCGCCAGTGACC AGGCGTACTTCGAAAAGACCAAAACGCAACAGGATGATGCCCCCAAGGTCAGCCCCAAGCCGCGCCGTGAACGGGCAAGCAAGCCTGCCGCCCCGCTGGC GCCAGTCTGGAAGCTGGAAGATTTCGCAGTCGAGCCAGCCGAGGGCAAGACCCGGTTTCATGACTTCAAGCTCGCCCCCGAGCTTATGCACGCCATTCAC GACCTTGGCTTTCCTTATTGCACGCCGATCCAGGCTCAGGTTCTCGGCTTTACTCTAAAAGGCCGCGACGCTATCGGCCGGGCCCAGACCGGCACCGGGA AAACCGCCGCGTTCCTTATTTCGACCATCACTCAGCTGCTACAAACCCCACCACCTGCGGATCGATACATGGGCGAGCCACGTGCCCTAATCATCGCGCC GACTCGTGAGCTGGTCGTGCAAATCGCTAATGACGCGCTGAACCTGACCAAATACACCGGTTTGAACGTCATGAGCTTTGTCGGCGGCATGGACTTCGAC AAGCAACTCAAGGCGCTTGAGTCCCGCTATTGCGACATCCTGGTGGCAACGCCCGGACGCCTGCTGGACTTCAATCAGCGCGGCGAAGTGCACCTGGACA TGGTTGAGGTGCTGGTGCTCGACGAAGCGGATCGCATGCTGGACATGGGCTTCATTCCTCAGGTCCGCCAGATCATTCGCCAGACGCCACCCAAGAGCGA ACGCCAGACGTTGCTGTTCTCGGCCACTTTCACCGAAGACGTGATGAATCTGGCCAAGCAGTGGACCACGGAGCCGGCCATCGTCGAGATCGAAGCGATC AACGTGGCCAGCGACACAGTCGAACAACACGTGTATGCCGTGGCAGGCAGCGACAAATACAAGTTGCTCTACAACCTCATTACCCAGAATGACTGGACCC GCGTGATGGTCTTCGCCAACCGCAAGGATGAGGTGCGTCGCATTGAGGAGCGCCTTACCCGCGATGGTATCAGCGCTGTTCAAATGTCAGGCGACGTTCC ACAACACAAGCGCATCCGAGCACTAGAAGGTTTCCGCGAAGGCAAGATTCGCGTGATGGTTGCCACCGATGTCGCCGGCCGCGGGATTCATGTCGATGGC ATCAGCCACGTGATCAATTTTACCCTGCCGGAAGTCCCCGACGACTACGTCCACCGAATCGGCCGTACCGGCCGGGCCGGAGCCAGCGGCACTTCGATCA GTTTTGCCGGGGAAGACGATTCCTTCGCCCTGCCGGCGATCGAGGCATTGCTGGGTCGAACGATCAGTTGCGAAATGCCGCCTGCCGAGCTGCTGGCAGC TGTCCCACCCAAGCGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCAGAAACAAAAAAGGCGAAGCAGGGCCCGGCTTCGCCTTTTATGCACCTAGAGTCTGGTCTTCGGATCATAGCTCGCATTCGGCTAGTCGGTCGGAC CCTGTTGCCAGCGATCGGCTGCATCCCGGTCGCTGCAGCGACCTTCGACCCAGCGTGTTCCCTCCGGGGTGTCTTCCTTTTTCCAGAAAGGCGCGCGGGT CTTCAGATAATCCATAACGAATCGACACCCATCAAAAGCGGCCTCGCGGTGAGCGCTTGCGGCACCGACAAACACGATCGGCTCCCCCGGCTCCAAGCGC CCTACTCGGTGCAGAATCTCCAACCTGAGCAGCGGCCAGCGCCCAGCAGCCTCGTCGATGATTTTCTGCAGCGCCTTCTCGGTCATTCCCGGGGCATGCT CGAGGAACATTCCGGCAACATCGCGACCCTCATTGAAATCACGTACGTAGCCGACGAAACCGGTGACCGCACCGATACCGAGATTGGCCGCATGCAAGGC
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| Amino Acid Sequence |
>ATP-dependent RNA helicase RhlB
MLKALKKMFGKGSNQPATTEAESSTSIHQGASDQAYFEKTKTQQDDAPKVSPKPRRERASKPAAPLAPVWKLEDFAVEPAEGKTRFHDFKLAPELMHAIH DLGFPYCTPIQAQVLGFTLKGRDAIGRAQTGTGKTAAFLISTITQLLQTPPPADRYMGEPRALIIAPTRELVVQIANDALNLTKYTGLNVMSFVGGMDFD KQLKALESRYCDILVATPGRLLDFNQRGEVHLDMVEVLVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTEDVMNLAKQWTTEPAIVEIEAI NVASDTVEQHVYAVAGSDKYKLLYNLITQNDWTRVMVFANRKDEVRRIEERLTRDGISAVQMSGDVPQHKRIRALEGFREGKIRVMVATDVAGRGIHVDG ISHVINFTLPEVPDDYVHRIGRTGRAGASGTSISFAGEDDSFALPAIEALLGRTISCEMPPAELLAAVPPKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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