Pseudomonas sp. MT-1, MT1_RS13370
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MT-1. [Details] | |
| DNA Sequence Upstream of Gene |
CCAATGCCTGGTTAACCGCCAGCCAGCCATTCACCGCTTCTTCCCCAGCATGCTGGAAGGCCCGTTCGAGAAGACGCACCTGTTCGCGTCGCAATGCCTG CTCTAGCTTTGCACCCTCGGCAGTGAAGCGCAGCATGCGCTTGCGCTTGTCTTCGTCGGCCGTCCTGCTCTCCACCAGATGCATTTCAATCAGCTGGCGC AATGGCGTATTCAAGGCCTGCTTGCTAACCCCCAGGTAGCTGAGTAGCTCTTTAACGCTGAGGTCGGGGTAGCTTGCGATAAAAAACAGGATTCTGTGAT GCACTCGGGACAGTCCGCGTCGGGCAAGCATCTCGTCCGGCTTGGCTGTAAACGCCTGATAGCCTAGGAAGAAGCTCTCCATGATCTGGCGCTGAACAGT GCTTTTTTTTAGGTCAGGCATATTGACGTATTTACGGTTGAGGGCGTAATTTCGGTCAAGTAGTTTGACTCATTTTTCTTATTCCTGCATCTGGTGCCCC
|
|
| DNA Sequence for Gene |
>MT1_RS13370
ATGGTCTTCTCCGAACGCATTGACCGCCTGAAAAGCTCGCTGATCCGTGAAATTCTTGCCGCTGCACAGCGTCCTGAGGTGATGTCTTTCGCTGGTGGAC TGCCTGCTGAATCCATGCTGCCGAAGGTCGACTGGGCGCCCATGCCGGCGAGCCTGGGTCAGTACGGGATGAGCGAAGGGGAGCCCGCACTGCGCGAGGC CATCGCGGAGGAAGCCCGAGCAATCGGTGTTTCTTGCTCGGCCAGTCAAGTGCTGATCGTCAGCGGTTCCCAGCAGACCCTGGACCTCGCATCCAAGCTG TTCATCGATCGGGGCACCGAGGTGCTGCTCGAGGCGCCGACTTATCTAGCCGCCCTGCAGGCTTTTCAGTTGTTCGGCGCCGACTGTCTGGCGGTGCCAC AGGAGTCCGATGGGCCATCGCTGGTCGCGCTGCGTCGGCGGCTGGAACAGCACAAGCCGGCCTTTGCCTACCTTATCCCAACGTTCCAGAATCCTTCGGC GGTCCGTTATAGCGAGGAAAAGCGTGATGCGGTAGCCGCGCTGCTTGACGAGTTCGGCGTGACCCTGATTGAAGATGAACCCTACCGCGAACTGGTATTC GACGAAGGGCGTGCTCGCCCAATCGTTAGCCGCTTGCGCAACGCAAGCTGGATCTACACCGGGACAGTTTCCAAGACCCTGCTTCCAGGGCTACGTGTCG GGTATCTGATCGCAACACCGGACCTGTTCCCTTATCTGTTACGCCTGAAGCAGTCAGCCGACCTGCATACCAATCGCGTTGGTCAGTGGCAGGCGCTTCA GTGGCTCGGCAGCGAGCAGTATCGGTTGCATCTGGGTGAGCTGCGCAGTTTCTACCGCCTGCGCCGTGATGCGATGCAGGCTGCGTTGGATGATCATTTC GCCGATCTCGCCGATTGGCAGGTGCCGCAGGGGGGGCTGTTCTTCTGGCTGCAGCTGAAACAACCGATCGACACCCGAACGCTGCTCGATTCCGCGTTGG CGCAGGATGTGGTGTTCATGCCTGGCGAGCCGTTCTTCGTCGACCCCGAGAAAAATCTCGGCTATCTGCGGCTCAACTTCAGTCATGTCGCGCCAGAGCG CCTTGATGAGGGTATTCGCCGCCTAGCGAGTGTGGTACGCGAGGCGCTGGTGGTCGAGGCAGCATAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTCAGATGCGGTGGATGCACCGTTGGAGGGCAAAATGACATACAAGGTGTACGGCGACTATCGGTCCGGTAATTGCTACAAGGTGAAGCTGATGCTGCAC TTGCTGGGGCGATCGTATGAGTGGGTTCCGGTGGATATCCTGCGCGGTGAAAGCCGTGAGGCAGCATTTCTGAAAAAGAATCCCAACGGCAAGATACCGG TGCTCGAGCTGGAAGACGGTAGCTGCCTGTGGGAATCGAACGCAATCCTCAACTTCCTCGCTGAAGGAAGTGAATTCCTGCCGGCCGATGCCCGGTTGCG GACCCAGGTTCTGCAGTGGCAGTTCTTCGAGCAATACAGCCATGAACCCTTCATCGCTGTGGCGCGGTTCATCAAGGTTTATCTGGGTTTGCCGGACGAT CGCCTCGATGAATATGCAGCCAAGCAACTGGACGGTTATCACGCGCTTGATGTCATGGAGCAGCAGCTGCTACGCACGCCCTATCTGGTTGGCGAGCACT
|
|
| Amino Acid Sequence |
>GntR family transcriptional regulator
MVFSERIDRLKSSLIREILAAAQRPEVMSFAGGLPAESMLPKVDWAPMPASLGQYGMSEGEPALREAIAEEARAIGVSCSASQVLIVSGSQQTLDLASKL FIDRGTEVLLEAPTYLAALQAFQLFGADCLAVPQESDGPSLVALRRRLEQHKPAFAYLIPTFQNPSAVRYSEEKRDAVAALLDEFGVTLIEDEPYRELVF DEGRARPIVSRLRNASWIYTGTVSKTLLPGLRVGYLIATPDLFPYLLRLKQSADLHTNRVGQWQALQWLGSEQYRLHLGELRSFYRLRRDAMQAALDDHF ADLADWQVPQGGLFFWLQLKQPIDTRTLLDSALAQDVVFMPGEPFFVDPEKNLGYLRLNFSHVAPERLDEGIRRLASVVREALVVEAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|