Pseudomonas sp. MT-1, MT1_RS11085
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MT-1. [Details] | |
| DNA Sequence Upstream of Gene |
ATTGATGTGGGATTTCTCGGTGCTGCCCAGGTCGATAAGTACGGCAACATCAACACCACGGTGATCGGCGACTATCACCAACCGAAAGTTCGCTTGCCAG GGGCCGGCGGCGCGCCGGAAATTGCCGGGTCGGCGAAAAAGGTGCTGATCATCCTCAAACAGTCGCACCGCACCTTTGTCGACAAGCTGGCGTTCATCAC CTCGGTCGGTTTCGGCGAAGGCGGTGAGCACCGCAAGCAGCTCGGGCTGCCCGGCAATGGCCCGGTTGGGATCATCACTGACCTCTGCATCATGGAGCCC GAAGCGGGGTCCAACGAATTCGTGGTGACCTCGCTGCATCCGGGCGTGAGCCGCGAACAGGTGACCGAGAACACCGGCTGGGCCATTCGTTTCGCCGATC AACTGGGCGAAACCGCGGCACCGACCGAAACTGAACTGCAAGCGCTGCGCGCCCTGGAAGCACGCACCGCTGCCGCCCATGGACAAGCTGGAGGTGACGA
|
|
| DNA Sequence for Gene |
>MT1_RS11085
GTGACACGCGACGTCTTTATCTGTGATGCAGTCCGTACGCCCATTGGCCGCTTCGGCGGCGCGCTCTCAGCGGTGCGTACCGACGATCTGGCAGCTATCC CGATCAAGGCACTGTTGGAGCGCAATCCCGGCCTCGATCCCGCGGCCATCGAAGAAGTCTTCATGGGCAGCGCCAATCAGGCCGGCGAAGACAACCGCAA CGTTGCGCGCATGGCTGCGCTATTGGCTGGCCTGCCGGAAACCGTGCCCGGTGTGACGCTCAATCGTCTTTGCGCCTCGGGTATGGACGCGGTGGGCAGC GCTTTCCGGGCGATCGCCTGCGGTGAGATGGAACTGGCCATTGCCGGTGGCGTTGAATCCATGACCCGCGCGCCCTACGTAATGGGCAAGGCCGATACCG CCTTCGGCCGGACCCAGAAAATCGAGGACACCACGATTGGCTGGCGCTTCATCAATCCCAAGATGAAGGAGATGTACGGCGTCGATGCCATGCCGCAGAC CGCGGACAATGTCGCCGAGGAGCACAGGATCAGCCGCGAGGACCAGGATGCCTTCGCGCTGCGCAGCCAGCAGCGCACCGGCAAGGCACAGACGGCTGGT TTCTTCGCCGAAGAGATCGTGCCGGTGGTGATCAAAGGCCGCAAGGGCGACACCGTGGTCGACACCGACGAGCATCCACGTCCGGATACATCTGCCGAGG CGCTGGCCAAACTCAAGCCGGTCAATGGCCCGGACAAAACCGTTACCGCAGGCAACGCCTCGGGCGTCAATGACGGTGCGGCGGCGATGATCCTGGCCAG TGCCGACGCGGTGCAGAAATATGGCCTCACGCCTCGCGCTAAGGTGCTCGGTATGGCCAGTGCCGGTGTAGCGCCGCGGGTCATGGGTTACGGGCCGGTG CCGGCGGTACGCAAGCTGTGCGAGCGCCTGAACCTCGCGGTCGACGATTTCGACGTGATCGAACTCAACGAGGCTTTCGCCGCCCAGGCGCTGGCCGTCA CTCGCGATCTGGGCCTCGAAGACGACAGCCCGAAGGTCAACCCGCAGGGCGGTGCCATCGCCCTCGGCCATCCGCTGGGCATGAGCGGTGCGCGGCTGGT GCTGACCACCGTGCATGCGCTGGAGAAGAGCGGCGGCAAGCTCGGGCTGGCGACCATGTGCGTCGGTGTGGGGCAGGGCTTAGCCTTGGCGGTTGAGAGA GTTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GAGGCGCGCCGTGGTGGGCTGAAGCCCACCCTACAGGAACTGTGCTGCGCGCTGGTAGGGTGGGCTTCAGCCCACCATTGCTCTCACAGCTGTGATGGGT TTGGCCTCGGCATGATTTGTACAACGGCCGTCTTACTCATTCGCGGATACCTATAAATCCGACTTCCAGGAGGGTCAGTAGGGTGGGCTTCAGCCCACCA GCGCTACCCACGACGGCGTTTTCCGCGCCACGGCACTGGTGTGATTGCAGGCACAGCATCTTCCGTGCACGTGCGCTGCCACCTCTAACTCGACGTTCAG GAGGGCTCCCATGCCCAGCATCAAACTCGCCGACGGCGAGCTGAACTACCGTTTCGATGGCCCGGTTGATGCGCCGGTCCTCGTGTTGTCCAACTCGCTT GGAACGACGCTAGATATGTGGGACTTGCAGGTTTCTGTATTCAGCGAACAGTTCCGTGTGCTGCGCTATGACACCCGCGGTCACGGCAGCTCGTCCGTCA
|
|
| Amino Acid Sequence |
>beta-ketoadipyl CoA thiolase
MTRDVFICDAVRTPIGRFGGALSAVRTDDLAAIPIKALLERNPGLDPAAIEEVFMGSANQAGEDNRNVARMAALLAGLPETVPGVTLNRLCASGMDAVGS AFRAIACGEMELAIAGGVESMTRAPYVMGKADTAFGRTQKIEDTTIGWRFINPKMKEMYGVDAMPQTADNVAEEHRISREDQDAFALRSQQRTGKAQTAG FFAEEIVPVVIKGRKGDTVVDTDEHPRPDTSAEALAKLKPVNGPDKTVTAGNASGVNDGAAAMILASADAVQKYGLTPRAKVLGMASAGVAPRVMGYGPV PAVRKLCERLNLAVDDFDVIELNEAFAAQALAVTRDLGLEDDSPKVNPQGGAIALGHPLGMSGARLVLTTVHALEKSGGKLGLATMCVGVGQGLALAVER V
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|