Pseudomonas sp. MT-1, MT1_RS08490
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MT-1. [Details] | |
| DNA Sequence Upstream of Gene |
TAAGTAGTAGAAAGTCGCGGTCCCCAGAGCGGACCGCGCGTTGTTGCCCGGCAGGCCGGCCCCCATCACGTACATGTGTACGTGATGGGGCTCCGACCCG CCAGGCGCCTAGCGCTGCCTCGCTCTGGAAACCGCTCACACCGAGCTGCTGCTGAAAAGCGCTGCGTCGAGGCTTGAGGGCAACACCGACCCAGTAGGAG CGAGGGGGACGCCTAGTCCTTGCTCGCGATCCACTATCCGCCAACTCCCGATCCGAGTTAGTGCAATAGCCAGAGGCCAGCCCTGATCCAGTCCCCTCGC CCCTCCGGGGAGAGGGCTAGGGTGAGGGGCAGCCCACCAGACAACACAAAGGCCGGGCCCAAACCCCGACCTGATACAGAACATAAAGGGCGCGGGGCAC ACCACCCTCCCCCAACAAAACACCCGCTTTTGCGTGCAAACCAAAAGCCACCAGACATTTTCGACCGGCCACGACCGGTCCCCAATCAGGAGAAACCGCC
|
|
| DNA Sequence for Gene |
>MT1_RS08490
ATGCTGAGCTGGGACGAATTCGACGAAGAAGACACCACCACCACCGCGCAGGCCGCCCCCCAAGCCGCTGCTACAAATACTGACGCGCCGGCCAAACTCG ACAAGGACGCCGCCGGCTCCGTCGAAGAAGCCCGCGCCGTAGCCGCTGACGACTCCGCTGCCGTCGCCCGCGCCAAGAAAGCCCTGGACGATCTCGACAT CCAGGAAGGCCTCGACGAACTGGAAGGCGAATCCGCCCGCGTTCACGTCGGCGACAAGCAGATGATCAACGCCCGCGCCGACCTCAACCAGCTCGTACCC TTCAAGTACGACTGGGCCTGGCAGAAGTATCTGGATGGTTGCGCCAACCACTGGATGCCGCAGGAAGTGAACATGAACGCCGACATCGCCCTTTGGAAAA CGCCGGACGGCCTCTCCGAGGACGAGCGCCGCATCGTCAAGCGCAACCTCGGCTTCTTCTCCACCGCCGACAGCCTGGTCGCCAACAACCTCGTGCTGGC CGTGTACCGCCTGATCACCAACCCCGAGTGCCGCCAGTACATCCTGCGCCAGGCCTTCGAAGAGGCGATCCACACCCACGCTTACCAGTACTGCATCGAA TCGCTGGGCATGGATGAAGGCGAGATCTTCAACATGTACCACGAGATCCCGAGCGTCGCGAAGAAAGCCTCCTGGGGCCTCAAATACACCCGCTCCATCT CCGACCCGACCTTCCAGACCGGCACCGTCGAGACGGATAAAGAGTTCCTGCGCAACCTCATCGCCTACTACTGCGTACTGGAAGGCATCTTCTTCTACTG CGGCTTCACCCAGATCCTCTCCATGGGCCGCCGCAACAAGATGACCGGCACCGCCGAGCAGTTCCAGTACATCCTGCGCGACGAGTCCATGCACCTGAAC TTCGGCATCGACGTGATCAACCAGATCAAGATCGAAAACCCACACCTGTGGGACGCTGCCATGAAGGACGAAGCGACCCAGATGATTCTCCAGGGCACCC AACTGGAAATCGAATACGCCCGCGACACCATGCCCCGCGGTGTCCTCGGCATGAACGCCTCGATGATGGAGGACTACCTCAAGTTCATCGCCAACCGTCG CCTGACGCAGATTGGCTTGAAGGAAGAGTATCCAGGCACCACCAACCCGTTCCCGTGGATGAGCGAGATCATGGACTTGAAGAAGGAGAAGAACTTCTTT GAGACGCGGGTAATTGAGTATCAGACGGGTGGGGCTTTGAGCTGGGATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GACTGCACTAAACCATATAAATGCCCCGCCTAAAGGGGCATTTATCGTTTCAGCGTTAGAAGAAGGGAAGCCCATGAACATATATGAATTTACGAGCAGT TTTCGAAACCACCCCGTGCTGTTCGTTGGAACGGGCGTTAGCCTTCGTTATCTGGAAGATTCTTATACGTGGGATTCCCTACTAAGAAAGATCGCAAGCG AAATATCGGATGATGAAGAATATTACTTAGACATTAAAGCCCAGAGCGAATCGAGCGGGCGCTTTCATTTTGAGAAAATCGCCACGCAACTCGAAGATGA CTTCAATGAAGCCATAAAGAAGGACCGGCACGGTAAATTAAAGTCCGTAAACGACACCTTCTACGAGCATATGCACGCGGGCGAAAAACTAAGCCGCCTC AAGATTTATATCTCTCAGCTTTTGAACAAGCCAACCCTAAAAGATGGCATGACAGAAGAGCTTGCCGCCCTAAAAAAGGCAAGCAAAAATATCGGCTCGA
|
|
| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDEEDTTTTAQAAPQAAATNTDAPAKLDKDAAGSVEEARAVAADDSAAVARAKKALDDLDIQEGLDELEGESARVHVGDKQMINARADLNQLVP FKYDWAWQKYLDGCANHWMPQEVNMNADIALWKTPDGLSEDERRIVKRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIE SLGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPTFQTGTVETDKEFLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGTAEQFQYILRDESMHLN FGIDVINQIKIENPHLWDAAMKDEATQMILQGTQLEIEYARDTMPRGVLGMNASMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF ETRVIEYQTGGALSWD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|