Pseudomonas sp. MT-1, MT1_RS02395
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MT-1. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGATCTGCGAGACCCGCGACACCATGCGGCGGCTAGCAATGCGCACGGCAGGGTCTTCGCTGGCCATCATCTCGAACGAGAAGGTGGTCACGGCCTCG CTCAGTTGCGACAGGCTGCGCGCTGTCATGCTCAGAAACTCGGCGAGTTGCTCGTTACAAGTGTGCATTCCATTGCCACCTAACAGTTGATATCAGCATG ATGTTACTGCATTTTCGCCACCTGACTGCATCGCCTCTTTGGTCGAATAACCCTAACGGCAGGGTTGAGCCCAGACGCGTTTGCGTCATGCACGGCAACT CATGAACAAAACAGGCGAATCGCCCTGCCAAGCTTGGCAGGGCTCTGGCCAGCGGTTTGCCGGAATAATGCGCTCAGTCACCTTCACAGCCGTTCGAGGC TCAGCGCCATGGACGGGAATTTTTGTATTTTCGGCGGGTCTATCCTGCCGACATGCCAAGAGCCTGTAGCTCTGTAGCGCGCCAAGGAAGCCACTCAATC
|
|
| DNA Sequence for Gene |
>MT1_RS02395
ATGCGCATTCTCGTAACCGGCGGAGCCGGATTCATCGGCTCTGCTCTGATCCGCCATCTGATCAAAGACACCGGGCACAGCGTCCTTAATCTAGACAAGC TGACCTACGCCGGCAATCTCGAGTCGCTGGCGGAAGTCCACAGCAGCGACCGCTATCAATTCCTTCAAGCCGATATCGCCGATCGCGAACGTGTCAGTGA AGCGCTGCTGGAATTCCAGCCGGATGCCATCATGCACCTGGCCGCCGAATCCCATGTCGATCGCTCGATCGACGGCCCGGCCGAGTTCATCCAGACCAAC ATCGTCGGCACTTATCAGCTGCTCGAGGCAACACGTGCCTATTGGCAGTCGCTGCCAGCCGAGCGCCGCGAAGCCTTCCGCTTCCACCACATCTCCACCG ATGAGGTCTATGGCGACCTGCACGGCGTCGATGACCTGTTTACTGAAACCACACCCTACGCGCCCAGCTCGCCCTATTCGGCCAGCAAGGCCTCGTCGGA CCATCTGGTTCGCGCCTGGCAGCGCACCTACGGCCTGCCAGTACTGATCACCAATTGCTCGAACAACTACGGGCCGTATCACTTCCCCGAGAAGCTGATC CCGCTGGTGATCCTCAACGCGCTGGATGGCAAGCCGCTGCCGGTCTATGGCAATGGCACTCAGGTGCGTGACTGGTTGTTCGTCGAGGATCATGCCCGCG CCCTGTTCAAGGTGGTCAGCGAAGGCCAGGTCGGCGAGACCTACAACATCGGCGGTCACAACGAGCAAAAGAACATCGACGTGGTGCGCGGCATCTGCGC CCTGCTCGAAGAGCTGGCGCCGCATAAGCCCGAAGGGCTTGAGCGTTTCGAGGACCTGATCACCTTCGTCAAGGACCGCCCCGGTCACGACCTGCGCTAC GCCATCGACGCCAGCAAGATTGAGCGCGAGCTCGGTTGGGTCCCGCAAGAGACTTTCGAGACCGGCCTGCGCAAGACCGTGCAGTGGTATTTGAACAACC TCGAATGGTGCCGTCGCGTCCAGGACGGCAGCTATCAACGTGAGCGCCTCGGCGCCCTGGAGAACGCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AAGGAATCATCCTCGCCGGAGGCTCCGGCACCCGTCTGCACCCCATCACCCTGGGCGTATCCAAGCAGCTGCTGCCGATCTACGACAAGCCGATGGCCTA CTACCCAATATCGGTGCTGATGCTCGCCGGGATTCGCGACATCCTGCTGATTTCAACGCCGCAGGACCTGCCGCAGTACAAGAACCTGCTGGGTGATGGC AGCCAGTTCGGCGTGAACATCAGCTACGCCGAGCAGCCGTCGCCGGACGGTCTGGCCCAGGCCTTCTTGATCGGCGAAGAGTTCATTGGCGACGACTCGG TGTGCCTGATCCTCGGCGACAATATCTTCCATGGTCAGCACTTCACCGAGAAGCTGCAGCGTGCTTCGGCACAGAAGAAAGGCGCCACGGTATTCGGCTA TTGGGTCAAGGATCCGGAGCGCTTCGGCGTGATCGATTTCGACGAAACGGGCAAAGCCCTGTCCATCGAAGAAAAGCCGGCGAAGCCGAAGTCCAGCTAT
|
|
| Amino Acid Sequence |
>dTDP-glucose 4,6-dehydratase
MRILVTGGAGFIGSALIRHLIKDTGHSVLNLDKLTYAGNLESLAEVHSSDRYQFLQADIADRERVSEALLEFQPDAIMHLAAESHVDRSIDGPAEFIQTN IVGTYQLLEATRAYWQSLPAERREAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLPVLITNCSNNYGPYHFPEKLI PLVILNALDGKPLPVYGNGTQVRDWLFVEDHARALFKVVSEGQVGETYNIGGHNEQKNIDVVRGICALLEELAPHKPEGLERFEDLITFVKDRPGHDLRY AIDASKIERELGWVPQETFETGLRKTVQWYLNNLEWCRRVQDGSYQRERLGALENA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|