Pseudomonas sp. MRSN12121, TO66_RS31010

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. MRSN12121, complete genome. [Details]
DNA Sequence Upstream of Gene
ACCTGCACCAACCAGAACCTGCCGCGCCGGCTCAAGCTGGGCCAGATCAACCAGGCGTGCGAGGAAACCCCGGAGTTCCTCAGCTTCCGCAATATCACCC CGGCCACCTCGAGTTACGCGCCGCCGCTGAACCGCGATTTCCTGTGGAAGCTGATCAGCAACATGTCGCTCAACTACCTGTCACTGGCCAACGTCGATGC GCTCAAGGTGATCCTCGAGACCTACGACCTGCCGCGGTACTACGACCAGCACCTGGAAAAGGTCAGCAAGCGCTTGCTGGGCGGGCTCAAGTCGATCCGC CACGAGCATGTCGACCGGCTGCACCGGGGCCTGCCGCTGCGTGGCTTGCGCACCGAGCTGACCATCGATCCGGAAGGCTATATCGGTGAGGGCGACATGT TCGTCTTCGCTTCGGTTCTCAACGAGTTTTTCGCTCTTTACGCCAGTCTCAACTCGTACCACGAGCTGCGGGTAAAAAGTACACAGGGAGAGGTGTACCA
DNA Sequence for Gene
>TO66_RS31010
ATGGACACCACGCATGGGGCTTCAGCCCCTGCTCTAAGCGGGCTGACCCGGGTCATCCGCGAGTACTCGCTGTTCCAGGCCGTGTTGCTGGTAGTGGACC GGCTGCGCGACTCGCACCCGGGCCTGAGCGAAGAGGATCTCTACGACCAGCTGGAATTCCAGGCCAACCCGAGCCTGGGTTTCCCCGGCAGCGATGTCGA TCGCGTGGAGTTTTTCGAAGAGCACGGGCAGATGCGCGCGCGCCTGCGTTTCAACCTGATCGGGCTGTTCGGCTCCGGTTCGCCGTTGCCGGCGTTCTAC GGCGAGCAGGCCCTGGGCGACAGCGAGGACGGCAACCCGACCCGCAATTTCCTCGACCTGTTCCACCATCGCCTGCAGCGGCTGATGCTGCCGATCTGGC GCAAGTACCGCTACCGCGCCAGCTTCAAGAGCGGTGCCATCGACCCGTTCTCCGCCCAGCTGTTCGCCCTGATCGGCCTGGGCGGCGAAGACATCCGCAA GGCCAAGGAGCTGAACTGGAAACGCCTGCTGCCGTACCTGGGCCTGCTCAGCCTGCGCGCCCACTCGGCGGCGCTGATCGAGGCCGTGCTGCGCTACTAC TTCAAGCACGCGGACCTGGTGATCGAGCAATGCATCGAGCGCCGGGTGGAGATTCTCGAAGAGCAGCGCAACCGCCTGGGCCGCGCCAACAGCCAGCTGG GCGAGGACCTGGTGCTGGGCGAGCGGGTGCGCGACCGCAGCGGCAAGTTCCGCATCCATATCCGCCAGCTCGACTGGCAACGCTTCCACGAATTCCTGCC GATCGGTTTCGGCTACCAGCCGTTGTGCGCGCTGGTGCGGTTCACCCTGCGTGACCCGCTGGACTACGACATTCGCCTGGTCCTGCGCCAGGAAGAAATC CGCGAACTGCGCATCGGTGAGCAGAACGCCTGTCGCCTCGGGTGGACCAGTTGGCTGGGCCGCGAACGCGCGGACGGCGTGGTGACCCTGGGCAGCAAAA TTCATTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGACAGATGACATGATCAACGTAGACCTGCAGCAATTGATCCAGGCGCTGGACGCTGAGACCCGCCGCGACCTGGAAAGCTCCGCCGAACGCTGTGTCGC CCGGGGCGGCAGCAAGATCCTCGTCGAGGACCTGTTGCTGGGCCTGCTGGAGCGCCCGCAAGGCCTGCTCGCCCGTGCGCTGCAGGACGCCGAGGTGGAT GCCGGCGAGCTGAGCGCGGCCCTGCAATCGCGGGTCGAGCACAGCGCCTCGCGCAACCCGGTGTTCGCCCCGGAACTGGTGCAGTGGCTGCAGGACGCCT TGCTGGTGGCCAACCTCGAACTGGGCCAGAGCCAGGTCGAGCAGGCGGCGCTGATCCTCGCGCTGCTGCGCAACCCGCTGCGTTATGCCGGGAGCCGTTA CCAGCCGCTGCTGGCCAAGCTCAACATTGAACGCTTGAAAGGCTTTGCCCTGTCGCAGAAGGAAGAACCGGCCAGCGGCAAGCCCGCCGCGCCTGGTGAA
Amino Acid Sequence
>type VI secretion protein
MDTTHGASAPALSGLTRVIREYSLFQAVLLVVDRLRDSHPGLSEEDLYDQLEFQANPSLGFPGSDVDRVEFFEEHGQMRARLRFNLIGLFGSGSPLPAFY GEQALGDSEDGNPTRNFLDLFHHRLQRLMLPIWRKYRYRASFKSGAIDPFSAQLFALIGLGGEDIRKAKELNWKRLLPYLGLLSLRAHSAALIEAVLRYY FKHADLVIEQCIERRVEILEEQRNRLGRANSQLGEDLVLGERVRDRSGKFRIHIRQLDWQRFHEFLPIGFGYQPLCALVRFTLRDPLDYDIRLVLRQEEI RELRIGEQNACRLGWTSWLGRERADGVVTLGSKIH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site