Strain | Pseudomonas sp. MRSN12121, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AATGCCGGAAGCGGCTCAGGCGCGCCAGCAACCAGCGCATGGTCAGGGTCGAGGGTGCCTTCATGCGCAGGATGTCATCCTCGGCGCGCAGGGTATTGCA GGCGCGCTCGAGGGCGGTGAAGCCTTCGCGGATGCCCGGCAACAGCAACCGCGCGGCCTCGGTCAGTTGCAGGTTGCGCCCGCTGCGCTGGAACAGCCGG CAGGCGAAGTGTTCTTCCAGGGTACGGATATGCCGGCTGACGGCACTCTGGGTAATCGACAGTTCCTCGGCCGCGCGAGTGAACGAGCTGTGCCGCGCCG CGGCCTCGAAGGCGCGCAAGGCATACAGGGGCGGAAGACGACGGGGCATGGCAGCACTCCACAGGCGCAAGGGCGACAACTTAGCAGAATTCACCCAGCA TGAGTTTTAATCATGCTACCAATCGTTTTTATCCCTTTGTGCAAGTCGCCCAGAGCACCGAGAATCAACGTTCTTGACTCCCTCCCCGCGCTTGAGACCG
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DNA Sequence for Gene |
>TO66_RS30715
ATGATCATGCAGCATCCAGCACGTACCGAACTCTGGGCCATTCTGCGGTTGGCCGGACCGCTGATCGCCTCGCAGTTGGCGCACATGCTGATGGTCCTGA CCGACACCCTGATGATGGCCCGCCTCAGCCCGGAAGCCCTGGCCGGCGGCGGCCTGGGCGCGGCCACCTATTCGTTCGTGTCGATTTTCTGCATCGGCGT GATCGCCGCGGTCGGCACCCTGGTCGCGATCCGCCAGGGCGCCGGCGACATCGAGGGCGCCGCCCGCCTGACCCAGGCCGGGCTCTGGCTGGCCTGGCTG ATGGCGCTGGTCGCCGGCTTGCTGTTGTGGAACCTCAAGCCGGTATTGCTGCTGTTCGGCCAGACCGAGAGCAACGTGCAGTCCGCCGGCCAGTTCCTGC TGATCTTGCCGTTCGCCCTGCCCGGCTACCTGAGCTTCATGGCCCTGCGCGGCTTCACCAGCGCCATCGGCCGCGCCACGCCGGTGATGGTCATCAGCCT GGGCGGCACCGTGGCCAACTTCCTGCTCAACTACGCCTTGATCACCGGCATGTTCGGCTTGCCGAAACTGGGGCTGGTGGGCATCGGCCTGGTCACCGCG ATCGTCGCCAACTGCATGGCCCTGGCGCTGGCCTGGCATATCAAGCGGCATCCGGCCTATGCCGCCTACCCGCTGCGCCAGGGCCTGGCGCGGCCCAACC GCCAGTACCTGCGGGAACTGTGGCGCCTGGGCCTGCCCATCGGCGGCACCTATGCGGTGGAAGTCGGGCTGTTCGCCTTCGCCGCGCTGTGCATGGGCAC CATGGGCAGCACCCAGCTGGCGGCGCACCAGATCGCCCTGCAGATCGTCTCGGTGGCCTTCATGGTGCCGGCCGGGATCTCCTACGCGATCACCATGCGC ATCGGCCAGCACTACGGCGCCGGGCAGCTGTTGCAGGCGCGCCTGGCCGGGCGGGTCGGGATCGCCTTTGGCGGCGCGGCGATGCTGTGTTTCGCCATGG TGTTCTGGCTCTTGCCGAACCAGTTGATCGGGCTGTTCCTCGACCATGACGACCCGGCCTTTCGCGAGGTGATCAACCTGGCGGTCAGCCTGCTGGCGGT AGCAGCCTGGTTCGAGCTGTTCGACGGCACCCAGACCATCGCCATGGGCGCGATCCGCGGCCTCAAGGACGCCAAGACCACCTTCCTCGTGGGCCTGGGC TGCTACTGGCTGATCGGGGCGCCGACGGCCTGGCTGATGGCGTTCACCCTTGGCTGGGGAGCGACCGGCGTGTGGTGGGGCCTGGCGTCGGGGCTGGCCT GCGCCGCCATCAGCCTGACCCTGGCGTTTGAATGGAAGATGCAGCGGATGATCCGCCGGGAAGGCGCCGGCAGCCGTTCGCAGGATGGTTTCCAGGCAGT GCGGGATTCTCTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GAGGGGCGAGCCAGCTCGCTCTTACACAGTCAGGATCTGCTGGCTGCGGCCGAACGTCAGGTATTCCACCAGCTCCGCCAGCGGCAACGGCTTGCTGATC AGGTAGCCCTGCACCTGGTCGCAGCCGAAGCTGCGCAGCAAGGCCAGTTGCTCGGGGGTTTCCACGCCTTCGGCCACCACCTCGAGATGAAGGTTGTGCG CCAGGTTGATCATGGCGTGCACCAGCTTGCGGTTCTCCTCACGCTGCTCCATGCCGCCGACAAAGCTCTTGTCGATCTTCAGCAGGGCGATCGGCAGGCT GTTGAGGTGCACGAACGACGAGAAGCCGGTGCCGAAATCGTCCAGGGAAAACCGCACCCCCAGCCGCCCCAGCGCATCCATGGTCTGCTTGACCAGGTCG CTGCGGCGCATCACCGCGGTTTCGGTCAGCTCGAACTCCAGCCATTGCGCCTCGACCCCGCGCTCGGCAATCAGCCGGCTGAGGGTCGACAGCAGTTGGC
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Amino Acid Sequence |
>multidrug transporter
MIMQHPARTELWAILRLAGPLIASQLAHMLMVLTDTLMMARLSPEALAGGGLGAATYSFVSIFCIGVIAAVGTLVAIRQGAGDIEGAARLTQAGLWLAWL MALVAGLLLWNLKPVLLLFGQTESNVQSAGQFLLILPFALPGYLSFMALRGFTSAIGRATPVMVISLGGTVANFLLNYALITGMFGLPKLGLVGIGLVTA IVANCMALALAWHIKRHPAYAAYPLRQGLARPNRQYLRELWRLGLPIGGTYAVEVGLFAFAALCMGTMGSTQLAAHQIALQIVSVAFMVPAGISYAITMR IGQHYGAGQLLQARLAGRVGIAFGGAAMLCFAMVFWLLPNQLIGLFLDHDDPAFREVINLAVSLLAVAAWFELFDGTQTIAMGAIRGLKDAKTTFLVGLG CYWLIGAPTAWLMAFTLGWGATGVWWGLASGLACAAISLTLAFEWKMQRMIRREGAGSRSQDGFQAVRDSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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