Pseudomonas sp. MRSN12121, TO66_RS28525
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MRSN12121, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGCGAACAGCGCCGCGCCGTACGTCTGTACTAATACACAGACGTTCGCTGCAAGCTTCTGCCAAGCCCGGCCCTCAGCCGGGCTAATGGCATTTGCGG ACCACGCTTGATGCTTCACCGTCGACATCGCATGCGATCGAGACAAATCCGCTTCACCACGTCAGACCTGGCTCCTGCCAGCGGTGCACGTCTCTTCTGA CGAGCCTTCCAAGGCTACTGACGAGCACACCTTTCTGATTCCTCAACAGACTCAGCCCAAGGCGCCCTTCTCCAGCGCCCGCTTGTGAGCCATCCGAGAC CTGTCGGACTCAGAGCAATATCTTCAAATAGTCGAAGACTGATTGGAACTAACGTCAGTGGACTTTCGGCAGATACACTTCCCGATAGCGATCAAGCCAA CGACAGAGGGTCGAACGCACAACCGTCGCGTCTCGAGCACACCCGCTTTCGAAGCCTTCGCATTGGTCCAATTCTTTCGCGCAGTGATGACGAGAACGCC
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| DNA Sequence for Gene |
>TO66_RS28525
ATGGCCGGGCTGATTCCCCAGAGCTTTATTGACGACCTTCTGAACCGCACCGACATCGTCGATGTGGTCAGCTCGCGCGTGCAGATGAAAAAGGCCGGCA AGAACTTCACCGCCTGCTGCCCGTTCCACAAGGAGAAGACTCCCTCCTTCAGCGTCAGTCCTGACAAGCAGTTCTACTACTGCTTCGGCTGCGGCGCAGG GGGCAACGCCCTTGGCTTCATCATGGACCACGACAACCTGGACTTTCCCCAGGCGGTCGAGGAACTGGCCAAGGCCGCCGGCATGGAAGTGCCGCGCGAG GAAAGCGGGCGTTCGCACAAACCCCGGCAGCCCACCGATTCGCCGCTCTACCCGCTGCTCACCGCCGCCGCCGAATACTATCGCCAGGCGCTGAAAAGCC ACCCGGCCCGCAAGGCAGCCGTCGACTACCTCAAGGGGCGCGGCCTGACCGGCGAGATTGCCCGCGACTTTGGCCTCGGCTTCGCCCCACCAGGCTGGGA CAACCTGTTCAAGCACCTGAGCAGCGATACCCTGCAGCAGAAAGCCATGATCGATGCCGGCCTGCTGATCGAAAACGCCGAAACCGGCAAGCGTTACGAC CGCTTCCGCGACCGGGTGATGTTCCCGATCCGCGACAGCCGCGGCCGGATCATCGCCTTTGGTGGCCGGGTACTGGGCGACGACAAGCCGAAGTACCTGA ACTCGCCGGAAACCCCGGTATTCCACAAGGGCCAGGAGCTTTACGGCCTGTTCGAGGCGCGCAAGAACAACCGCAACCTCGACGAGATCATCGTCGTCGA AGGCTACATGGACGTCATCGCCCTCGCCCAACAAGGCCTGCGCAACGCCGTCGCAACCCTGGGCACCGCCACCAGCGAAGAACACCTCAAGCGCCTGTTC CGCATCGTGCCCAGCGTCCTGTTCTGCTTCGACGGCGACCAGGCCGGGCGCAAGGCCGCCTGGCGTGCCCTGGAAGCGACGCTTTCCAGCCTGCAGGACG GTCGTCGGGCCCGCTTCCTGTTCCTTCCCGAAGGCGAGGACCCGGACACCCTGATCCGCTCAGAGGGTACGGACGCCTTTCGGGCGCGCATCAATCAACA TGCCCAGCCGCTGGCCGACTATTTCTTCCAGCAACTGACCGAAGAAGCCGATCCGCGCTCGCTCGAGGGCAAGGCCCACCTGGCCACCCTGGCGGCACCG CTGATCGACAAGGTTCCCGGCGCCAACCTGCGGACCTTGATGCGTCAGCGCCTCAGCGAGATTACCGGGCTCAACAACGAGACCGTCAGTCAGCTGGTAC AAAGCGCCCCTCCCGAGGCGCCGCCGATGTACGACGCCGGTATCGACTACGACGCCATGCCGGACTACGCGGATTACCACGAGCCGCAAGAAGCCTACGT GCCGCAGCAGGAGTGGACGCCAAAGAAAAACGGCGCGAGCGGCAAGAAATGGGAAAACAAGCCGTGGGACAAAAAGGGCAAGCGTAACGGCGATCGCGAT CAGCCACGTGCCCCGCGCGTCCCGGCCGCCGTCGAACCCCCAACGCTGTCGGCTCTCCGCACCTTGCTGCATCACCCGCAACTGGCCGAAAAGGTTGAAG ACGCCGGGCATTTTGCCGCCGACGACAACACCAACACCCAGCTGCTGGTGGCCCTGATCGAAGCCGTGCAGAAAAATCCTAAGCTACGCTCTATTCATCA ACTCATGGCGCGCTGGCACGGCACGGAACAGGGCCGCCTGATCAAGGCGCTGGCGGAAAAGGAGTGGCTGATTGAAGGCGACAACCTTGAACAACAGTTT TTCGACACCATTAAAAGCTTGTCCGCTCGCCAACGTGAGCGTGTTTTGGAACAACTTCTCAGGAAATCGCGTCAAAGCGAATTGAGTGGCGAAGAAAAAA TTCAGCTGCTCGAGCTTTTAAAACGCAATGTTCCCGCATCAAACCCGACCTCAACTGGCGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTCATAGCTCGGGTATAATCCTCGGCTTGTTTTTTGCCCGCCAAGACCTTCAGTGGATAGGGTGTTATGTCCGGAAAAGCGCAACAGCAGTCTCGCCTC AAAGAGTTGATCAGCCGTGGTCGTGAGCAGGGTTACCTGACTTACGCGGAGGTCAACGACCACCTGCCGGAGGATATTTCAGATCCGGAACAGGTGGAAG ACATCATCCGCATGATCAACGACATGGGGATCAACGTATTCGAGAGTGCTCCGGATGCGGATGCCCTTTTGTTGGCCGAAGCCGATACCGACGAAGCAGC AGCTGAAGAAGCCGCCGCGGCGTTGGCGGCTGTGGAAACCGACATTGGTCGCACTACCGACCCAGTGCGCATGTACATGCGCGAAATGGGCACGGTAGAG CTGCTCACACGTGAAGGCGAAATCGAAATCGCCAAGCGTATCGAAGAGGGCATCCGTGAAGTGATGGGCGCGATTGCGCACTTCCCTGGCACGGTCGAGC
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| Amino Acid Sequence |
>DNA primase
MAGLIPQSFIDDLLNRTDIVDVVSSRVQMKKAGKNFTACCPFHKEKTPSFSVSPDKQFYYCFGCGAGGNALGFIMDHDNLDFPQAVEELAKAAGMEVPRE ESGRSHKPRQPTDSPLYPLLTAAAEYYRQALKSHPARKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLFKHLSSDTLQQKAMIDAGLLIENAETGKRYD RFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLFEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF RIVPSVLFCFDGDQAGRKAAWRALEATLSSLQDGRRARFLFLPEGEDPDTLIRSEGTDAFRARINQHAQPLADYFFQQLTEEADPRSLEGKAHLATLAAP LIDKVPGANLRTLMRQRLSEITGLNNETVSQLVQSAPPEAPPMYDAGIDYDAMPDYADYHEPQEAYVPQQEWTPKKNGASGKKWENKPWDKKGKRNGDRD QPRAPRVPAAVEPPTLSALRTLLHHPQLAEKVEDAGHFAADDNTNTQLLVALIEAVQKNPKLRSIHQLMARWHGTEQGRLIKALAEKEWLIEGDNLEQQF FDTIKSLSARQRERVLEQLLRKSRQSELSGEEKIQLLELLKRNVPASNPTSTGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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