Strain | Pseudomonas sp. MRSN12121, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGCGGCCTGAAGGCATTCGCCTCCCGCTGTAGGAGCGAGCGTGCTCGCGAGGGTCGTCACCGATAGCGCGGTGGATCCGAAGCATTGCGGCGCCCTCGGT TCATCGCGAGCAGGCTCGCTCCTGCAGGGTATGGGGCGAGGCTAAAGAAGCCTGAGATAGAGCCATCATGACCGGTAAATACGCCCTAGGTAGGGGCATG ACGCTGCCCCATGGCTGTGCAATACTCGGCGCCGTTCAAAAATGACAAAAGGCGAAAATCTCAGGTAATGCTCCTCCGCAAAACCCGCCAATACCGAGAT TTCTCTCTGAATTTAGCTGCTTTTAGAGTGAAAAAGCCTCTCGCGAGCTTTTTATACTGCACGCCCCACTGATCTTGCAGGATTTGTCCTACAAGACGCG TCGGCCCACAAGGTCGACCCGCTCTGGCGGGCACGGATCATCCGTCCATGCCTTGCAGATTCGGTGGCTCATATCCAATAACAAGATGAGGTTGTACCCC
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DNA Sequence for Gene |
>TO66_RS25090
ATGCCCGTTGGCAACCACCTGCCCCACGGCGAGACCGCTCAAGGCGGCCCGCTGAAACGCGAACTCGGCGAACGGCATATTCGCTTGATGGCGCTTGGCG CCTGTATCGGCGTCGGTCTGTTCCTCGGCTCGGCCAAGGCCATCGAGATGGCCGGCCCGGCCATCATGCTGTCCTATATCCTCGGCGGCCTGGCGATCCT GGTGATCATGCGCGCCCTCGGCGAGATGGCCGTGCATAACCCGGTCGCGGGTTCCTTCAGCCGTTACGCACAAGACTACCTGGGCCCGCTGGCGGGCTTT CTCACCGGCTGGAACTACTGGTTCCTGTGGCTGGTGACCTGCGTCGCGGAAATCACCGCGGTGGCGGTATACATGGGCATCTGGTTCCCCGATGTACCGC GCTGGATCTGGGCCCTGGCGGCCCTGGTGAGCATGGGCTCGATCAACCTGATCGCGGTCAAGGCCTTCGGTGAGTTCGAGTTCTGGTTCGCCCTGATCAA GATCGTCACCATCATCGCCATGGTCATCGGCGGCATCGGCATCATCGCCTTCGGTTTCGGCAACGACGGTGTGGCGCTGGGGATTTCCAACCTGTGGACC CACGGCGGCTTCATGCCCAACGGCGTGACCGGCGTGTTGATGTCGTTGCAAATGGTGATGTTCGCCTATCTGGGCGTGGAGATGATCGGCCTGACCGCCG GTGAAGCGAAGAACCCGCAGAAGACCATCCCCAATGCCATCGGCTCGGTGTTCTGGCGCATCCTGCTGTTCTATGTGGGCGCGCTGTTCGTGATCCTGTC GATCTACCCCTGGAACGAAATCGGCACCCAGGGCAGCCCGTTCGTGATGACCTTCGAGCGCCTGGGCATCAAGACCGCGGCCGGCATCATCAACTTCGTG GTGATCACCGCGGCGCTGTCGTCGTGCAACGGCGGCATTTTCAGCACCGGGCGCATGCTCTACAGCCTGGCGCAGAACGGCCAGGCCCCGGCCAGCTTCG CCAAGACCTCGAACAGCGGCGTCCCGCGTCGCGCGTTGCTGCTGTCGATCTTCGCCCTGCTGCTGGGGGTTCTGCTGAACTACCTGGTGCCGGAGAAGGT GTTCGTCTGGGTGACGTCCATCGCCACCTTCGGCGCGATCTGGACCTGGGTGATGATCCTGCTGGCGCAGCTCAAGTTCCGCAAAGGCCTGAGCGCCTCG GAGCGTGCGGGCCTGAAGTACCGCATGTGGCTGTACCCGGTCAGTTCCTACCTGGCGCTGGCGTTCCTGGTGCTGGTGGTCGGGTTGATGGCCTATTTCC CCGACACCCGCGTGGCGCTGTATGTGGGCCCGGCGTTCCTGGTGCTGCTGACGGCCTTGTTCTATCTGTTCAAGCTGCAACCGAACGATGCGCGACAGGG CGCGGTGCGCTCGGCCTCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCCAGTCTGCAAGACAGGAAAAGCCCCGGTCAGTGACCGGGGCTTTTTTCATGGTGGCGGGTCAGCTCCCCAACAGCCCGGTGGTGTCGGCATCGAACG CCGTTTTCGCCTGCTGCGCCGCGGCCCTCAACAGGGCCAGCAGCGCGGTTTCGCTGTACAGCCGGGTGCTCGCCAGGTGCTTGGGCGTCGGTTCGATCGG GATCAGCACGTCTTCATCGCGGGCGTGCAGCCAGATCGCCGCGACATGCAGCGCCGAGACGAACAGCAGGCGCAGTTCATAGGTCCGGCCCTTCAGGTGC GGGGTGTTCTCCGCCAGGTTCAGGGCATTGACCGTGGCCGCTGCCAGGGCGCCGTGGTTCAGTGCAGAGAACTCGACCTGGCCGCCGACTTCCGCCAGTT GGGCGTCGGCGATCGGCCCCGCGTCGCCGAACACCAGGTAATGCCAGTCTCCCGCCGTGGCCTGGGTGAGGCCCTGGCCCCGGGCCAGGTCTTCCAGGCT
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Amino Acid Sequence |
>D-alanine/D-serine/glycine permease
MPVGNHLPHGETAQGGPLKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYILGGLAILVIMRALGEMAVHNPVAGSFSRYAQDYLGPLAGF LTGWNYWFLWLVTCVAEITAVAVYMGIWFPDVPRWIWALAALVSMGSINLIAVKAFGEFEFWFALIKIVTIIAMVIGGIGIIAFGFGNDGVALGISNLWT HGGFMPNGVTGVLMSLQMVMFAYLGVEMIGLTAGEAKNPQKTIPNAIGSVFWRILLFYVGALFVILSIYPWNEIGTQGSPFVMTFERLGIKTAAGIINFV VITAALSSCNGGIFSTGRMLYSLAQNGQAPASFAKTSNSGVPRRALLLSIFALLLGVLLNYLVPEKVFVWVTSIATFGAIWTWVMILLAQLKFRKGLSAS ERAGLKYRMWLYPVSSYLALAFLVLVVGLMAYFPDTRVALYVGPAFLVLLTALFYLFKLQPNDARQGAVRSAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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