Strain | Pseudomonas sp. MRSN12121, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ATGATGGACGACGCGCTGCTGGCCGGTGAAATGGCCAAGGCTCGCAAACCGACCGACTGGGCCGTGACCGGCACCGCGCAATCCTATGAAATCTATGGCT GCATGGTGCGCAAGGGCGATGCCCCGTTCAAGAAAGCCGTGGACGACGCCATCGTCGCTACCTACAAGTCGGGCGAGATCAACAAGATCTACGACAAATG GTTCCAATCGCCGATCCCGCCAAAAGGCCTGAACCTGATGTTCCCGATGAGCGACGAGCTCAAGGCCCTGATCGCCAACCCGACCGACAAAGCGGCTGAC GACAAAAAGTCCTGATTCCTGACTAACCTTGTCTCCCGAGGGGCCCGGCCCCTCGGGAGCCTGTCACTACCTGCTGGCATTTTTGGAAACACTCGAACCG GTGGTTGTCGAGCCGATCGTGTGTGCCTGGCCGTCATCCGGGCGGGAAAGGATTTCCCCAAGCGGGTGCTTGTACATCGATCGATCAGGGGGAGACCCTA
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DNA Sequence for Gene |
>TO66_RS24940
ATGAATTACAACTGGGACTGGGGCGTGTTCTTCAAGTCCACCGGCGTGGGCAGCGAGACCTATCTCGACTGGTTCATCGCGGGCCTGGGCTGGACCATCG CCATCGCCGTGGTGGCCTGGATCGTCGCGCTGTTTCTGGGCTCGATCCTGGGCGTCATGCGGACTGTGCCGAACCGCCTGGTAGCGGGCATCGCCACCGT CTACGTGGAGATCTTCCGTAACGTGCCGCTGCTGGTTCAGCTGTTCATCTGGTACTTCCTGGTACCCGACCTGCTGCCGGCCAACCTGCAGGAATGGTTC AAGCAGGACCTCAACCCGACCACCTCGGCCTACCTGAGCGTCGTCGTGTGCCTGGGCCTGTTCACCGCTGCCCGGGTCTGCGAACAGGTGCGCACCGGGA TCCAGGCGCTGCCGCGCGGCCAGGAATCCGCCGCCCGCGCCATGGGTTTCTCGCTGCCGCAGATCTACTGGAACGTGCTGCTGCCCCAGGCCTACCGGAT CATCATTCCGCCGCTTACCTCGGAATTCCTCAACGTCTTCAAGAACTCCTCGGTCGCCTCGCTGATCGGCCTGATGGAGCTGCTGGCGCAGACCAAGCAG ACCGCCGAATTCTCGGCCAACCTGTTTGAAGCCTTCACCCTGGCCACGCTGATCTACTTCACCCTGAACATGAGCCTGATGCTGCTGATGCGCCTGGTCG AGAAGAAAGTCGCGGTGCCCGGCCTGATCTCCGTGGGGGGCAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGGAATTCGATTTCTCTGGCGTCGTCCCGGCCATTCCCGGCCTGTGGAACGGCATGCTGATGACCCTCAAGCTGATGGCCCTGGGCGTCGTCGGCGGGAT CATTCTCGGTACCATCCTGGCGCTGATGCGCCTGTCCCATAACAAACTGCTGTCGAACATCGCCGGCGTCTACGTCAACTACTTCCGTTCCATCCCGCTG CTGCTGGTGATCACCTGGTTCTACCTGGCGGTGCCGTTCGTGCTGCGCTGGATCACCGGCGAAGACACGCCGATCGGCGCCTTTGGCTCGTGCATCGTGG CCTTCATGATGTTCGAAGCGGCGTACTTCTGTGAAATCGTCCGGGCCGGCGTGCAGTCGATCCCCAAGGGCCAGATGGGCGCCGCCCAGGCACTGGGCAT GACCTACGGCCAGATGATGCGCCTGATCATCCTGCCCCAGGCGTTCCGCAAGATGACCCCGCTGCTGCTGCAACAGAGCATCATCCTGTTCCAGGACACC
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Amino Acid Sequence |
>amino acid ABC transporter permease
MNYNWDWGVFFKSTGVGSETYLDWFIAGLGWTIAIAVVAWIVALFLGSILGVMRTVPNRLVAGIATVYVEIFRNVPLLVQLFIWYFLVPDLLPANLQEWF KQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGFSLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ TAEFSANLFEAFTLATLIYFTLNMSLMLLMRLVEKKVAVPGLISVGGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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