Strain | Pseudomonas sp. MRSN12121, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CTACCGCGCCCTTCTGGCTGGACGACCTGAGCGCCAGCGGCATTCCCCATGAATGGAGCGCGGATATCCTCACCCGCCTCTGGCGCAAGCTGGCGCTCAA TTGCGCGATCAACCCGCTGACGGTCCTGCACGGCTGCCGCAACGGCGGCCTGCTGGAACATCATTGCGAAGTGGCCATGCTGTGCCTCGAGCTGACCGAG CTGCTGCAGCGTTGCGGCCAGCCGGCGGCCGCCGAAAACCTGCAACAAGAAGTCGAACGAGTGATCCAGGCGACCGCCGCCAACTATTCCTCCATGTACC AGGACGTCGCCAACCGGCGCAGGACCGAAATCAGCTACTTGCTGGGGTATGCCTGCAGCGTTGCCTCCCGGCATCGATTGAGCCTGCCGAATCTCGAGCG CCTGCAACGGCGGCTGGTGGAGCACCTGCAGCAACGCGGATTGCCCAGCGACTGAGCAGCGGCTACGCTGCCCACGTGTTCCTTTCTAGCGACCTCCCTG
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DNA Sequence for Gene |
>TO66_RS24445
ATGCCATTGCGCCAGCGCCTTGAAAACCTGCCGGTCGGCCAAAAGCTGCTGGCGGCCCTGCTCGTCCTGCTGATTACCGTGTTGCTGGTGGCCAACCTGA CCTTTATCAGCGCCGCCTACTGGATCTCCCAGGAAAGCATGGCACCGCAAGCCCTGCAGACCATCGGCCGGCTGGTCTCGAACCCGACCCTTGCCGCCCA GGCACTGGACTCGCCACAAAACGCCGAAAAACTGCTCAACGAGCTCAACAGCTACTCGCCCCTGCGGGCCGCGGCCATCTATGACGGCAAAGGCGCCCGC CTGGCCCAGTTGCAACATGGCGAGCGCTTGAAGCTGCCGGAGCGCTACCGGCATATCGAAGCCTGGCAACTGACCGAATTCCGCAGCAACCAGGTCATTG CCCTGCCTCGCGCCGGCCAGCCCCCGGGGCATCTGCTGCTGGTGGCCAGCAGCGAACTGCCGATGGCCTTCTATACCGGCACCCTGACCGCCAGCCTGGG CATCCTGATCTTCAGCGTACTGTTGTGGCTGGTGATTGCCCGGCAGATCAAACGGTTGATCACCCGCCCCATCCATCAACTGGAAGAGCTGTCCCGACAG GTGACCCGCGAGGAAAACTATTCACTGCGCGCCTCGCGCGGCAATCACGATGAAATCGGCAGCCTCGCCGAGGCCTTCAACACCATGCTGTCGCGCATCG AGGCGCGGGAGCAGCAACTCAAACGCGCCCGCGACGACTCCCAGGCCGCCTATGACCAGGCCCAGGGCCTGGCCGAGGAAACCCGCCATACCAACCGCAA GCTGGAACTGGAAGTCCAGGTGCGCAGCAAGATCGAGAAGAAACTCACCGGTTTCCAGAACTACCTCAACAGCATCATCGACTCGATGCCCTCGGCACTG ATCGCCCTGGACGAGCAGCTCTATGTCACCCAGTGGAACCAGGAGGCCAGCGCCCTCTCGGGCACCCGCCTGGACGAAGCCTTGAACCAGCCCATCTTCC TGGCTTTCGAACCGCTCAAGCCCTTCCTGCCCCAGCTCAAGGAAACCGTGGAGCAGCATACGGTCACCAAGGTCGAGCGGGTTACCTGGGTCAAGGATGA GGAAGCGCGGCACTATGCCCTGACGTTCTACCCGCTGATGGGCGGCGCCGGGCGCGGTGTGGTGATCCGGATCGACGACATCACCCAGCGCCTGTCCCTG GAAGAAATGATGGTGCAGTCGGAAAAGATGCTCTCCGTGGGCGGCCTCGCCGCCGGGATGGCGCATGAAATCAACAACCCTCTGGGCGCCATCCTGCACA ACGTGCAGAACATCCGCCGGCGCCTGTCCCCCGAATTGCCGAAGAACCTGGAGCATGCCGAGCAACTGGGCATCGAACTGGAAACCGTCAACCAATACCT GCAGGGCCGCGAAGTGCCACAACTGCTCGACGGCATCCAGCAGGCCGGCGCGCGGGCGGCGAAGATCGTCACCCACATGCTCAGCTTCAGCCGCCGCAGC AATCGCCAGATGGCGCCTTGCGACCTACCGGCCCTGATCGACCAGGCAGTGGAGATCGCCGGTAACGACTTCGACCTGGCCATCGGCTTCGACTTCAAGG GCCAGGCGATCATTCGCCAGTTCGACCCGCAACTGGGCCCGGTACTCGGCACCGCCAACGAGCTGGAACAGGTCCTGCTCAATCTGCTGAAAAACGCGGC CCAGGCCATCCACCAGCGTGCGGACGACAGCGAGCCGGGACGCATCATCCTGCGCACCCGGCTGAATCCGCCCTGGGCGGAAATCCAGGTCGAGGACAAC GGTATCGGCATGAGCGAAAGCGTGCGCAAACGCACCTTCGAGCCGTTCTTCACCACCAAGGAAATCGGCCAGGGTACGGGCCTGGGACTGTCGGTCTCGT ACTTCATCATCACCAACAATCACAAAGGCCAGATGGAAGTGCAGTCGGCGCAAGGCCAGGGCACCTGCTTCACCTTGCGCCTGCCCTTGGCGGGCAGCCA GCCGCCTCTGGAACATCCCCCACAGGAGAGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCATGGGCTTTCGCCTGTCGAAGATTTACACCCGCACCGGCGACAAAGGCGAAACCGGGCTGGGTGACGGACGCCGGGTTCCCAAGGACCATCCGCGGAT CGAGGCCATCGGCGAAGTCGATACACTGAACAGTCAGCTGGGGCTGCTGCTGGCCGGATTGGCCGAACAGCGCCTCGCACATCCCGGCCTACAGGAACTG ATCGAGGTGCTGAGCCCTTGCCAGCATCGCCTCTTCGACCTGGGTGGCGAGCTGGCCATGCCGGCGTACCAGGCCCTCGACACAGCCGAGGTCGAACGCC TGGAGCGTGCCATCGATACCTGGAACGAAGAGTTGGGACCGCTAGAGAACTTCATCCTGCCGGGTGGTTCGAGCCTGATCGCCCAGGCCCATGTCTGCCG CAGCCTGGCGCGCAGCGCCGAACGCCGCTGCCAGCACTTGAATGCCGTGGAACCGCTGGCGGGGGTCGGCCTGGCCTATATCAACCGCCTGTCCGACCTG
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Amino Acid Sequence |
>histidine kinase
MPLRQRLENLPVGQKLLAALLVLLITVLLVANLTFISAAYWISQESMAPQALQTIGRLVSNPTLAAQALDSPQNAEKLLNELNSYSPLRAAAIYDGKGAR LAQLQHGERLKLPERYRHIEAWQLTEFRSNQVIALPRAGQPPGHLLLVASSELPMAFYTGTLTASLGILIFSVLLWLVIARQIKRLITRPIHQLEELSRQ VTREENYSLRASRGNHDEIGSLAEAFNTMLSRIEAREQQLKRARDDSQAAYDQAQGLAEETRHTNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSAL IALDEQLYVTQWNQEASALSGTRLDEALNQPIFLAFEPLKPFLPQLKETVEQHTVTKVERVTWVKDEEARHYALTFYPLMGGAGRGVVIRIDDITQRLSL EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSPELPKNLEHAEQLGIELETVNQYLQGREVPQLLDGIQQAGARAAKIVTHMLSFSRRS NRQMAPCDLPALIDQAVEIAGNDFDLAIGFDFKGQAIIRQFDPQLGPVLGTANELEQVLLNLLKNAAQAIHQRADDSEPGRIILRTRLNPPWAEIQVEDN GIGMSESVRKRTFEPFFTTKEIGQGTGLGLSVSYFIITNNHKGQMEVQSAQGQGTCFTLRLPLAGSQPPLEHPPQER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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