Strain | Pseudomonas sp. MRSN12121, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGCCTTCGCCGAGACCTACGCCGTGCTGGGCAGGGATGCGCGCCAGGTTCCGGACCTGCCCTGCCCCTGGCTGGAGGGCCTGTACGTCAACAGCGGCCAT GGCTCGCGCGGGCTGATCACCGCGCCGCTGTCGGGCGAATTGCTGGCTGCCTGGCTGGACCACGAACCGCTGCCCTTGCCGCGCAGCGTGGCTGAAGCCT GTCACCCCAATCGCTTTGCCTTGCGTCGGTTGATTCGCGGCAAGCCCTGAAACCGGACGGCGATGCCAGCGCCCCCGGCATCGCCGCAGCACCCGCCGCA AACGCCCACGGCCCCTGCCGCCGAGGCAAAACTCCAGACATATCAAGGCCTTCACCTCGGCCAGCAGCGCACTCCCTTCCGCCACTTATAACCCATCGGT CTAAAACTCCAGGGTTTCACCTGGGTCAGTTTCCGGGTACCCGGCTGTTTTTGCCCGGTATGGCTTGACCCCTCCCCAACGGAAAAACCGGTAAGGACTT
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DNA Sequence for Gene |
>TO66_RS22705
ATGTGCGGATTAGCTGGAGAACTACGTTTTGATCACCGACCCGCCGACCTGGCAGCGGTCGAACGAATCACCCACCACCTCGCCCCTCGCGGCCCCGATG CCTGGGGCTTCCATAGCCAGGGTCCGATAGCCCTCGGCCACCGGCGCCTGAAGATCATGGACCTGTCGGACGGCTCGGCCCAGCCGATGATCGACAATCA ACTGGGCCTGTCCCTGGCCTTCAATGGCGCGATCTACAACTTCCCCGAGCTGCGCGCCGAACTGGAAAGCCTGGGCTACGCCTTTTATTCCGGCGGCGAC ACCGAAGTGCTGCTCAAGGGCTACCACGCCTGGGGCGCCGACCTGCTGCCACGGCTCAACGGCATGTTCGCCTTCGCCATCTGGGAGCGCGACGCCCAGC GCCTGTTCCTCGCCCGCGACCGGCTGGGGGTGAAACCGCTGTACCTGTCGCGCACCGGCCAGCGCCTGCGCTTCGCCTCGGCCCTGCCGGCGCTGCTCAA GGGCGGCGATATCAACCCGCTACTCGATCCGGTGGCGCTCAACCACTACCTGAATTTCCATGCCGTGGTGCCGGCGCCGCGCACCCTGCTGGCGGGCATC GAAAAACTGCCGCCGGCGACCTGGATGCGAATCGAGGCCGACGGCCGCAGCGAGCAGCACATCTGGTGGACACTGCCCTACGGCCCTCGCGCCGATGAAA CCGGGCTGACCCTGGAGGACTGGCGCGACCGGGTGCTCGAGAGTACCCGCGAGGCGGTGGCGATCCGCCAACGGGCGGCGGTGGATGTCGGCGTGCTGCT GTCCGGCGGGGTCGATTCGAGCCTGCTGGTCGGCCTGCTGCGGGAGGTCGGCGTGGAGCAGCTGTCGACGTTCTCCATCGGCTTCCAGGATGCCGGCGGC GAGCGCGGCGACGAGTTCCAGTATTCGGACCTGATCGCCCGCCACTACGGCACCGACCACCATCAGTTGCGCATCGACGAGCGCGAAATCATCGAACAGC TGCCCGCGGCGTTCCGCGCCATGAGCGAACCCATGGTCAGCCACGACTGCATCGCCTTCTACCTGCTGTCCCGGGAGGTCGCCCGGCACTGCAAGGTGGT GCAGAGCGGCCAGGGCGCCGACGAGCTGTTCGCCGGATACCACTGGTACCCGCAGGTGGACGGCGCCAGCGATCCCTACAGCGCCTACCGCCAGGCGTTC TTCGACCGCAGCTACGACGACTACGCCGCCACCGTGCAGCCGCAGTGGCTAGTGGCCAACGACGCCGCCGGCGATTTCGTGCGCGAGCATTTCGCCCAGC CCGGCGCCGACGCACCGGTGGACAAGGCCCTGCGCCTGGACAGCACGGTGATGCTGGTCGACGACCCGGTCAAGCGAGTGGACAACATGACCATGGCCTG GGGCCTGGAGGCCCGCACACCGTTCCTCGACTACCGGCTGGTGGAGCTGTCGGCCCGCGTGCCCGCCAGGTTCAAGCTGCCCGACGGCGGCAAGCAGGTG CTCAAGGAAGCCGCGCGCCTGGTGATTCCCAGCGAAGTGATCGACCGCAAGAAAGGCTACTTCCCGGTGCCGGGCCTCAAGCACTTGCAGGGCGACACCC TGGACTGGGTGCGCGAACTGCTGCTCGACCCGAGCCAGGATCGCGGCCTCTTCGACCCCGCGATGCTTGACCGCCTGCTGACCGACCCACAAGGCCAACT GACGCCGTTGCGCGGCTCCAAGCTCTGGCAACTGGCCGCGCTGAACCTGTGGCTCAGCGAACAAGGAATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTGATGAAACCCCATGCCACGGCCTACAGCCAACGCTTGCAGCGCGGCCAGGCGCCGTCCTACGAGCGGCTGCAGGCCCGTCTTGCCGAAGACCGCAGCG CCAGCGCCACCGATCCCATCACCGTGCATTGCGGCTGGGGCCGGCTGCTGATCGGCCACACCTTCCCCGACCCGACGAGCCTGGCCGAGGAGCTGCTCAA CGAAAACCCCGGCGAACGCGACATCGCCCTATATGTCGCCGCGCCCCAGCAGATTCTCGGACTGGAGCCCACCCAACTGTTCCTCGACCCGTCGGACACC CTGCGCCTGTGGTTCAGCGATTACCGCCAGGCCACCCGGGTGTTTCGCGGTTTCCGCATCCGCCGGGCGCAAAGCACCGCGGACTGGCAGGCCATCAACC AGCTGTACCTGGCGCGCAACATGCTGCCGGTCGACCCGAGCCTGCTGACGCCACGGCATGCCGGCGGCCCGGTGTACTGGCTGGCCGAAGACGAGGACAA
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Amino Acid Sequence |
>asparagine synthase
MCGLAGELRFDHRPADLAAVERITHHLAPRGPDAWGFHSQGPIALGHRRLKIMDLSDGSAQPMIDNQLGLSLAFNGAIYNFPELRAELESLGYAFYSGGD TEVLLKGYHAWGADLLPRLNGMFAFAIWERDAQRLFLARDRLGVKPLYLSRTGQRLRFASALPALLKGGDINPLLDPVALNHYLNFHAVVPAPRTLLAGI EKLPPATWMRIEADGRSEQHIWWTLPYGPRADETGLTLEDWRDRVLESTREAVAIRQRAAVDVGVLLSGGVDSSLLVGLLREVGVEQLSTFSIGFQDAGG ERGDEFQYSDLIARHYGTDHHQLRIDEREIIEQLPAAFRAMSEPMVSHDCIAFYLLSREVARHCKVVQSGQGADELFAGYHWYPQVDGASDPYSAYRQAF FDRSYDDYAATVQPQWLVANDAAGDFVREHFAQPGADAPVDKALRLDSTVMLVDDPVKRVDNMTMAWGLEARTPFLDYRLVELSARVPARFKLPDGGKQV LKEAARLVIPSEVIDRKKGYFPVPGLKHLQGDTLDWVRELLLDPSQDRGLFDPAMLDRLLTDPQGQLTPLRGSKLWQLAALNLWLSEQGI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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