Pseudomonas sp. MRSN12121, TO66_RS20275
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0008137 | NADH dehydrogenase (ubiquinone) activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01770
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0042773 | ATP synthesis coupled electron transport |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01770
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psem00190 | Oxidative phosphorylation | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | psem01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Hamap | MF_00445 | NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. | IPR010096 | NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 | 6 | 477 | 17.715309 |
| Pfam | PF00361 | Proton-conducting membrane transporter | IPR001750 | NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit | 126 | 422 | 2.0E-79 |
| PANTHER | PTHR22773 | NADH DEHYDROGENASE | - | - | 20 | 481 | 6.2E-99 |
| PRINTS | PR01434 | NADH-ubiquinone oxidoreductase chain 5 signature | - | - | 416 | 435 | 6.0E-5 |
| NCBIfam | TIGR01770 | JCVI: NADH-quinone oxidoreductase subunit NuoN | IPR010096 | NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 | 8 | 476 | 3.5E-126 |
| PRINTS | PR01434 | NADH-ubiquinone oxidoreductase chain 5 signature | - | - | 70 | 95 | 6.0E-5 |
| PRINTS | PR01434 | NADH-ubiquinone oxidoreductase chain 5 signature | - | - | 217 | 238 | 6.0E-5 |
| PRINTS | PR01434 | NADH-ubiquinone oxidoreductase chain 5 signature | - | - | 309 | 321 | 6.0E-5 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.