Pseudomonas sp. MRSN12121, TO66_RS16495
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MRSN12121, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTTTTGGGACCAGCCCTTTCAAGGGCTGGCGCTGAGGGCGACCAGGCCCGGGCGATCAGTCTTCCTTGCGAACGGTGGCGACGTCGTCGGCCTTGACGCG GATCTTCTTGCCGGCGATGTCCTCGAACTCGTAGAACCCGTCGCTGGTCTTGGCGTTCGGCATGTCCTTGGTCAGGTATTGCGTGCCGTTCTGCAGCGTC ACCACGGTCGGCGTGGCACAGCCGCCCAGGGCCAGAAAGGCGGCGACGGCCAGTGGCAGGGCCAGGTATTTGACGTTCATAGACAAACCTCTCTTCATGA ATCCTGTGAGTCCACCCACGTTTGGCGGCTCGCGACTATACGGCTATCCGCCCCGTTGGTGTAGTTAACGGCAGGAAAGTTCTGAGCGCGTCGCAAAAAA ACCTCCGTCGCCGCTGATCCAATAGTGTTTGCCAGGGTAGGGTGGCAGCTGCTATCTGTATGCATAACCAGTACCCACCTCTTTGCGGCGCGCTTGTCCT
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| DNA Sequence for Gene |
>TO66_RS16495
GTGACCTCCAATCCCCTGGAAAACCCTCTTTATTACCTGCACAACTTCCAGCAGGTGCTGGCCTGGCTCGAGTTGCGTTATGCCGACGTGCTGTCGCCCG AGGAGCAGGCTTTCATCGCCGATTTCTCGGCCCTGGCCCAGCCGTCCCAGGCCCTGCTAGTGCGCATGGTCATGCGCAAGGGCTGTCATTTTCGTAGCTC CCGGCTGGCCTATGAGGAAATCGGCGATACCGGGGCGGCGGTCGCGCCGCTGGTCCGCCTGGGCTGGGTCGACGAGCAGGCGCCGCTGACCCTGGAAGAG TTGTTCAACCTGTTGCAGAAGGCGGAAATCCTCCAGGGCTTCCAGGCGCTGATCGAGCAGCCCAAGGGCCGCAAGTCCGACTGGCTGGCCGCCCTGGCGC CACAGTTCGACGAGCCACGCAGCCTGGGCCAATGGTGCCCGGGGCTGGAGGACCGGGTGTGCAGCCTGACCGTCATGGCGCTGTGCGATCGCTTGCGCCT GATGTTCTTCGGCAACCTGTACCAGGACTGGTCGGAGTTCGTGCTGGCCGACCTTGGCATCTTCACCTACGAGAAGGTCGAGTTCCACGACGACGCCCGC GCCCTGCGCAGCCGCGCCGACGTCGAGGGCTTCATCTACCTGGAAGACTGCCGCCAGCGCTTCGAGGCCGGCGCGGCGCTGGGCGAGGTGCTGGCCGCCG CCCGGGCCTTCGCCAGCGACAACCCCTGGTTGCAGCGGCGCCGGGACAAATTGCTGTTCCTGCTGGGGCAACACGGCGAGCGGCTCGCCGACTGGCCGCT GGCGGCGGCCATCTACCAGGATTGTGCCTATCCCGGGGCGCGTATGCGCCTGATCCGGGTCTTCGAGCGCAGCGGCGATTATCCCCGAGCGTTGCTCCTG GCGGAGGAGGCCGGGCTGGCCCCGCAGAGCGCCGCCGAACAGCAGCAACTGCTGCGGGTGCTGCCGCGGCTGCGGCGCAAGCTTGGCGGCCCGGCCGCGC CCCGCGGCGGCGTGCGTCCGTTGTTGCGCCTGGACCTCAGCCTGCCGCGCAGCGATCCGCAGCTGTCGGTGGAGTTCCATGTCCAGGCCCACCTGCATGA GGTCGAGGCGCCGGTGCACTACGTGGAGAACAGCCTGATCAACTCGCTGTTCGGGCTGCTCTGCTGGCCGGCGATCTTCGCGCCGCTGCCCGGCGCCTTC TTCCACCCGTTCCAGCGCGGGCCGGCGGACCTCTTGAGCGAGGATTTCCACGCCCGTCGCGCCGAGCTGTTCCAGGCCTGCCTGGCGGAGCTGGACGACG GGCGCTATGCGCAGACCATCCGCCAGCGCTACCTCGACAAGTGGGGCGTGCAATCGCCGTTCGTGTTCTGGGCCGCCCTCGACGAAGCGCTGCTGGAGCA GGCCCTGGCCTGCCTGCCGGCGGCGCACCTGCGGCACTGGTTCGAGCGCCTGTTGCAGGACATCAAGGCCAACCGCGCCGGCATGCCGGACCTGATCCAG TTCTGGCCGCAGCAGAAAACCTACCGGATGATCGAGGTCAAGGGCCCCGGCGATCGCCTGCAGGATAACCAGCTGCGCTGGCTGGAGTTCTGCCAGCAGC ACCAGATGCCGGTGGCGGTCTGCTACGTGCAATGGGCGGAGCAGGGCGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACTACCGCATCGCGGTACGGGCGCTGTGCGAGTTCACCGCCAAGGCCGGCGACCTCGACCTGCGCTTCACCCCGTCGCCGACCGCGCTGGAAGGCATCCA GGGCCATCGCACGGTCGCGGCGCGGCGCAGCGCGAACTATCAGCGCGAGGTCGCCCTCGAGGGCAGCTTCGGCGCCTTGACGGTCAGGGGCAGGGCGGAC GGCTACGACCCGGACGCCAACCTGCTGGAAGAGGTCAAGACCTACCGTGGCGACCTCGAGCGCATGCCGGCCAACCATCGCCAGCTGCATTGGGCCCAGG CCAAGGTCTACGGCTGGCTGCTGTGCCAGCAGTTGCAACTGCGCCGCATCCGCCTGGCGCTGGTGTATTTCGACATCCAGAGCGAACGCGAAACGTCCTT GCTGGAGGAGCACGACGCCCAGGCCCTGGAGCAGTTCTTCAACCGCCAGTGCCGCCTGTTCCTGCAATGGGCCGAACAGGAGCTGGCCCATCGCACCGCG
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| Amino Acid Sequence |
>nuclease
MTSNPLENPLYYLHNFQQVLAWLELRYADVLSPEEQAFIADFSALAQPSQALLVRMVMRKGCHFRSSRLAYEEIGDTGAAVAPLVRLGWVDEQAPLTLEE LFNLLQKAEILQGFQALIEQPKGRKSDWLAALAPQFDEPRSLGQWCPGLEDRVCSLTVMALCDRLRLMFFGNLYQDWSEFVLADLGIFTYEKVEFHDDAR ALRSRADVEGFIYLEDCRQRFEAGAALGEVLAAARAFASDNPWLQRRRDKLLFLLGQHGERLADWPLAAAIYQDCAYPGARMRLIRVFERSGDYPRALLL AEEAGLAPQSAAEQQQLLRVLPRLRRKLGGPAAPRGGVRPLLRLDLSLPRSDPQLSVEFHVQAHLHEVEAPVHYVENSLINSLFGLLCWPAIFAPLPGAF FHPFQRGPADLLSEDFHARRAELFQACLAELDDGRYAQTIRQRYLDKWGVQSPFVFWAALDEALLEQALACLPAAHLRHWFERLLQDIKANRAGMPDLIQ FWPQQKTYRMIEVKGPGDRLQDNQLRWLEFCQQHQMPVAVCYVQWAEQGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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