Pseudomonas sp. MRSN12121, TO66_RS15245

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. MRSN12121, complete genome. [Details]
DNA Sequence Upstream of Gene
AGGACGGAAAACTCTCCGGCGACAAGAACAAGGGGCTGTCGATCCGCGTCGAAGGCACGCCTTACGAGCGCCAGGGCTCCTTGCTGTTCACCGACGTGGC GGTGGATCGCGGCACCGGGCAGATTGTCCTGCGCGGCAAGTTCGACAACGCAGACGGCACCCTGCTGCCGGGCATGTATGTGCGGGTGACTACGCCCCAG GGCACGGATAACCAGGCGATCCTCGTGCCGCAACGCGCGGTGCAACGCACCAGCGATGGCAGCGCCCAGGTGCTGGTGATCGGCGCGGACGAGCGGGTCG AGGCGCGCGCGGTGCGCACCGGCGCCATGCAGGGTTCGCGCTGGCAGATCAGCGAAGGCTTGAAGGCGGGGGACCAGGTCATCGTCGGTGGCCTGGCCGG CCTGCAACCGGGTGCCAAGGTCGTGCCCAGCCAGCCCCAGGCCCAGGCTCAGTTGCCTGACTCGAAACAGTAAGGCCGAGTTCGCCGCGAGGATTTTCCG
DNA Sequence for Gene
>TO66_RS15245
ATGTCTCAATTCTTCATCAAGCGCCCGAACTTCGCCTGGGTAGTGGCGCTGTTCATTTCACTGGCGGGCCTGCTGGTCATTTCCAAGCTGCCCGTGGCGC AGTACCCCAGCGTCGCGCCGCCGCAGATCACCATCACCGCCACCTATCCCGGCGCCTCGGCGAAGGTACTGGTGGACTCGGTCACCTCCGTGCTCGAGGA GTCGCTCAACGGGGCCAAGGGCCTGCTCTATTTCGAGTCGACCAACAACTCCAACGGCGTCGCCGAAATCGTGGTCACGTTCCAGCCCGGGACCGACCCG GATCTGGCCCAGGTGGACGTGCAGAACCGCCTGAAGAAGGCCGAGGCGCGCATGCCGCAAGCCGTGCTGACCCAGGGCCTGCAGGTCGAGCAGTCCAGCG CCGGTTTCCTGCTGATCTATGCGCTCAGCTACAAGGAAGGCAGCGCGAATGGCGACACCACGGCGCTGGGCGACTACGCCGCGCGCAACATCAACAACGA GCTGCGGCGCCTGCCCGGCGTCGGCAAGTTGCAATTCTTCTCCTCCGAAGCGGCCATGCGCGTGTGGATCGACCCACAGAAACTGGTGGGCTACGGGCTG TCCATCGACGACGTGAGCAACGCCATTCGTGGCCAGAACGTCCAGGTGCCGGCCGGTGCCTTCGGCGCCGCCCCGGGCACTTCGGAGCAGGAGCTGACCG CGACGCTGGCGGTCAAGGGCACCCTGGACAATCCGGCCGAGTTTGGCCAGATCGTGCTGCGCGCCAATGAAGACGGCTCGCTGTTGAAACTGGCCGATGT CGCGCGCCTGGAAGTCGGCAAGGAGAGCTACAACCTGTCCTCGCGCCTGAACGGCAACCCGACCGTGGGCGGCGCGATCCAGCTGTCGCCTGGCGCCAAC GCCATCGAGACCGCGACCCTGGTGAAGGCGCGCCTCGCCGAGCTGTCGGCGTTCTTCCCCGAGAACATGGAGTATTCCGTTCCCTACGACACCTCGCGCT TCGTCGACGTGGCCATCGAGAAGGTGATCCACACCCTGATCGAGGCGATGGTCCTGGTGTTCCTGGTGATGTTCCTGTTCCTGCAGAACGTGCGCTACAC CCTGATTCCATCCATCGTCGTGCCGGTGTGCCTGCTGGGTACGCTGTTGGTGATGTACCTGATGGGCTTCTCGGTGAACATGATGACCATGTTCGGCATG GTCCTGGCGATCGGTATCCTGGTGGACGACGCCATCGTGGTGGTGGAAAACGTCGAACGGATCATGGCCGAAGAGGGGCTGTCCCCGGTCGATGCGACGA TCAAGGCGATGCAGCAGGTGTCCGGGGCCATCATCGGCATCACCCTGGTGTTGTCGGCGGTGTTCCTGCCACTGGCGTTCATGGCCGGTTCGGTGGGGGT CATCTACCAGCAGTTTTCGGTGTCGCTGTCGGTATCGATCCTGTTCTCCGGTTTCCTCGCGCTGACCTTCACCCCGGCGCTGTGCGCCACGCTGCTCAAG CCGGTCCCCGAGGGGCATCACGAGAAGGGCGGTTTCTTCGGCGCCTTCAACCGTGGTTTCGCCCGCGTCACCGAGCGCTACTCGGTCCTCAACTCCAAGC TGGTGGCCCGTGCCGCGCGTTTCATGCTGGTGTACGTCGGCATCATCGGCGTGCTCGGCTACTTCTATCTGCGCCTGCCGGAAGCCTTCGTGCCTTCGGA AGACCTGGGCTACATGGTGGTCGATGTGCAACTGCCGCCCGGCGCGGCGCGCTCCCGTACCGACGCCACCGGTGCAGAACTCGAACGCTTCCTCAAGTCC CGCGAGGCCGTGGCTTCGGTGTTCCTGGTGTCGGGCTTCAGCTTCTCCGGCCAGGGCGACAACGCTGCGCTGGCATTCCCGACGTTCAAGGACTGGTCGG AACGTAATGCGCAACAGTCGGCCGAGGCGGAAATCGCCGCGCTGAACGAACACTTCGCGGTCCCTGGCGACGGCACCATCATGGCCGTGTCGCCACCGCC TATCGACGGCCTGGGCAACTCCGGTGGTTTCGCGTTGCGCCTGATGGACCGTGGCGGCCTGGGTCGCGAGGCGTTGCTGCAAGCCCGGGATACGCTGCTG AGCCAGGTCCAGGGCAATCCCAAGTTCCTCTACGCGATGATGGAAGGCCTGGCCGAAGCGCCGCAACTGCGCCTGGTGATCGACCGTGAGAAGGCACGCA CCCTGGGTGTGAACTTCGAGACCATCAGCGGCACGCTGTCCTCGGCTTTCGGTTCGAACGTGATCAACGACTTCACCAACGCCGGTCGCCAGCAGCGGGT AGTGATCCAGGCCGAGCAGGGCTCGCGGATGACCCCGGAGAGCGTGCTCAAGCTGTATGTGCCCAACGCCAAGGGCGACCTGGTTCCGCTCAGCGCCTTC GTGACCACACGCTGGGAGGACGGGCCGGTACAACTGGTGCGCTACAACGGCTATCCGTCGATCCGTATCGTGGGCGACGCCGGCCCCGGTTTCAGTACCG GCCAGGCCATGGCGGAAATCGAGCACCTGGCCGCGCAACTGCCGGCGGGTATCGGCTACGAATGGACCGGCCTGTCCTACCAGGAAAAGGTCTCCAGCGG CCAGGCCACGCAGCTGTTCGCCCTCGCGATCCTGGTGGTGTTCCTGTTGCTGGTAGCCCTTTACGAGAGCTGGGCGATTCCCCTGACGGTGATGCTGATC GTCCCGATCGGTGCGATCGGCGCGGTGCTCGCGGTGATGGTGGTCGGCCTGCCGAACGACGTGTACTTCAAGGTCGGCCTGATCACCATCATCGGCCTGG CGGCGAAGAACGCGATCCTCATCGTCGAGTTCGCCAAGGAGCTGTGGGAGAAGGGCTACAGCCTGCGCGACGCGGCCATCGAGGCGGCCCGCCTGCGCTT CCGGCCGATCATCATGACCTCCATGGCCTTCATTCTCGGCGTGGTGCCCCTGGCGTTGGCCGCCGGCGCGGGCGCGGCCAGCCAGCGTGCGATCGGCACC GGGGTGATCGGCGGGATGCTCAGCGCGACGCTGCTGGGTGTGCTGTTCGTACCGATCTGCTTTGTCTGGGTGCTGTCGCTGTTGCGCAGCAAGCCGGCCC CCATCGAACAACCGGCCGCGGCCCAGGAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTGCATGCGGATCTCAGCCTTTTCTACGCTTCTGATCGCCATGGCGCTGGGGGGATGCTCACTGGCTCCCACCTATGAACGTCCCGTCGCGCCGGTGGCC GACAGCTGGAGCGGTGAAGCCGCCCAGCGCGGCAGCGCCATCAACGACCTGGCCTGGCAGACGTTTATCGTCGACCCACAGTTGCGGCGCCTGATCGGCA CCGCGCTGGATAACAACCGCTCGCTGCGCCAGACGCTCCTGGACATCGAGCAGGCCCGCGCGCAGTACCGCATCCAGCGCGCCGACCGGGTGCCCGGGCT CAACGCGGGCGCCTCGGGCAATCGCCAGCGAGTGCCGGCCGACCTGTCCAACAGCGGCAGGGCGGGAGTGGCCAGCAACTATCAGGTGGGCCTGTCGCTG CCGGAATACGAGCTGGACCTGTTCGGCCGGGTCAAGAGCCTCAGCGATGCCGCGCTGCAGGAGTACCTGGCCACCGAGGAGGCCGGGCGCGCGGCGCAGA
Amino Acid Sequence
>multidrug efflux RND transporter permease subunit
MSQFFIKRPNFAWVVALFISLAGLLVISKLPVAQYPSVAPPQITITATYPGASAKVLVDSVTSVLEESLNGAKGLLYFESTNNSNGVAEIVVTFQPGTDP DLAQVDVQNRLKKAEARMPQAVLTQGLQVEQSSAGFLLIYALSYKEGSANGDTTALGDYAARNINNELRRLPGVGKLQFFSSEAAMRVWIDPQKLVGYGL SIDDVSNAIRGQNVQVPAGAFGAAPGTSEQELTATLAVKGTLDNPAEFGQIVLRANEDGSLLKLADVARLEVGKESYNLSSRLNGNPTVGGAIQLSPGAN AIETATLVKARLAELSAFFPENMEYSVPYDTSRFVDVAIEKVIHTLIEAMVLVFLVMFLFLQNVRYTLIPSIVVPVCLLGTLLVMYLMGFSVNMMTMFGM VLAIGILVDDAIVVVENVERIMAEEGLSPVDATIKAMQQVSGAIIGITLVLSAVFLPLAFMAGSVGVIYQQFSVSLSVSILFSGFLALTFTPALCATLLK PVPEGHHEKGGFFGAFNRGFARVTERYSVLNSKLVARAARFMLVYVGIIGVLGYFYLRLPEAFVPSEDLGYMVVDVQLPPGAARSRTDATGAELERFLKS REAVASVFLVSGFSFSGQGDNAALAFPTFKDWSERNAQQSAEAEIAALNEHFAVPGDGTIMAVSPPPIDGLGNSGGFALRLMDRGGLGREALLQARDTLL SQVQGNPKFLYAMMEGLAEAPQLRLVIDREKARTLGVNFETISGTLSSAFGSNVINDFTNAGRQQRVVIQAEQGSRMTPESVLKLYVPNAKGDLVPLSAF VTTRWEDGPVQLVRYNGYPSIRIVGDAGPGFSTGQAMAEIEHLAAQLPAGIGYEWTGLSYQEKVSSGQATQLFALAILVVFLLLVALYESWAIPLTVMLI VPIGAIGAVLAVMVVGLPNDVYFKVGLITIIGLAAKNAILIVEFAKELWEKGYSLRDAAIEAARLRFRPIIMTSMAFILGVVPLALAAGAGAASQRAIGT GVIGGMLSATLLGVLFVPICFVWVLSLLRSKPAPIEQPAAAQE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site