Pseudomonas sp. MRSN12121, TO66_RS11780

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. MRSN12121, complete genome. [Details]
DNA Sequence Upstream of Gene
CCGAAGTCGCGGCATACATCTTGTGCAACAGTGTCGACGCAGGTTTTTTCGGACTGTTTTCCAGGCTCCACAGCGCCGCATCGGCGGACGAATGCAGCGC CGCGGTCACGGCACCGTTGATCTTCTTCGCGACCGGATCAGGCAAGGCCTTTACCGCGCTTTCGATGGGCGAACCGAGCAAACCGGACAGCCTCGCCGTC AGGGAGGGCGACTCCAGCAAACCCACGGCGTGCTTCAGGTCCTTGTAGTCTTGCGGGTTGTCTCTGATATTCACGACCTTCTCCTGGCAAATGCACCGCT CATAACGGGCAAGGTAATGAATTTCCACAACGCTGGATACTTTACTGGCCGACCACTGCCCTGGGCAGCACCCCCGCGTTGCGCTTGTCACTGAACCGGC CCCGGACCGGCCGGCAGCCCGCGCCGAAAAGCACAAGACTTCGCGCTGAAAAGCCGGATAATACCGGCCAATTTTTTGCTCGTACTGCTGGTAATCCCCC
DNA Sequence for Gene
>TO66_RS11780
ATGGAAATCAAGGTCAACTTTCTCGACAACCTCCGGCTCGAAGCCAAGTTCGACGACTTCACGGTGGTGGCAGACCAGCCCATCCGCTACAAGGGCGATG GTTCGGCGCCGGGTCCGTTCGACTATTTCCTGGCGTCGTCGGCCTTGTGCGCGGCGTACTTCGTCAAGCTGTACTGCCAGACCCGCGACATCCCCACCGA CAACATTCGCCTGTCGCAGAACAACATCGTCGACCCGGAAAACCGCTACAACCAGATCTTCAAGATCCAGGTCGAGCTGCCGGCGGACATCTCCGAGAAG GACCGCCTGGGCATCCTGCGCTCCATCGACCGCTGCACGGTGAAAAAGGTGGTGCAGACCGGTCCCGAGTTCGTGATCGAGGAAGTGGAAAACCTCGACG CCGATGCCCAGGCCCTGCTGATGCCGGGCCTGGAGTCGGGCACCCGCACCTGCATCGCCGGCAAGGACCTGCCGCTGGAGCAGACCATCGCCAACATGTC GGCGATCCTCGCGGACCTGGGGATGAAGATCGAGATCGCTTCCTGGCGCAATATCGTGCCCAACGTCTGGTCGCTGCACATTCGCGATGCGCAGTCGCCG ATGTGCTTCACCAACGGCAAGGGCGCGACCAAGGAAGGCGCGCTGGCGTCGGCCCTGGGCGAGTTCATCGAGCGCCTGAACTGCAACTTCTTCTACAACG ATCAGTTCTGGGGCGAAGAGATCGCCAACGCCGAGTTCGTCCACTACCCGGACGAGCGCTGGTTCAAGCCGGGCCCCAAGGATGAACTGCCCAGCGAAAT CCTCGACCCCTACTGCCTGAAGATCTACAACCGCGATGGCGAACTGCGCGGCTCGCACCTGATCGACACCAATTCCGGCAACGCGGAGCGCGGCATTGTT TCGCTGCCGTTCGTGCGCCAGTCGGATGGCGAGGTGGTGTACTTCCCTTCCAACCTGATCGAGAACCTCTACCTCAGCAACGGCATGAGCGCCGGCAACA CCCTGGCCGAAGCCCAGGTGCAGTGCCTGTCGGAGATCTTCGAGCGCGCCGTCAAACGCGAAATCATCGAAGGCGAATTCGCCCTGCCGGACGTGCCCCA GGAAGTGCTGGCCAAATACCCTGGCATCCTGGCCGGCATCCAGGGCCTGGAGGAGCAAGGCTTCCCGGTGCTGGTCAAGGACGCATCCCTGGGCGGCGAA TTCCCGGTGATGTGCGTGACCCTGATGAACCCGCGCACCGGCGGCGTGTTCGCCTCGTTCGGCGCCCACCCGAGCTTCGAAGTGGCGCTGGAGCGCAGCC TTACCGAACTGCTGCAGGGCCGCAGTTTCGAGGGCTTGAACGACTTGCCGCAGCCGACGTTCGAAGGCCAGGCGGTCACCGAGCCGAACAACTTCGTCGA ACACTTCATCGACTCCAGCGGCGTGGTGTCGTGGCGCTTCTTCAGCGCCCAGTCGGATTACGAATTCGTCGAGTGGGACTTCTCCGGCCAGGGCTCAGAC TCTAATGCCCAGGAAGCCGCGACCTTGTTCGGCATTCTCGAAGGCATGAGCAAGGAAGCCTACATGGCGGTGTACGAACACCTGGGCGCCACCGCCTGCC GCATCCTGGTGCCGGACTATTCGGAAATCTACCCGGTGGACGACCTGATCTGGGACAACACCAACAAGGCGCTGTTCTTCCGCGAAGACATCCTCAACCT GCACCGCCTCGACGAGGATGAGTTGCAGGCGCTGCTCGAGCGCCTGATAGACAGCGAGCTCGACGACTACACCGATATCACCACCCTGATCGGTATCGAG TTCGACGACAACACCGCCTGGGGCCAACTGACCATCCTGGAGTTGAAACTGCTGATCTTCCTGGCCTTGCAGCAATATGAAGAAGCCAAGGAATGCGTGG AGATGTTCCTGCAGTACAACGACAACACCGTCGAGCGTGGCCTGTTCTACCAGGCGATGAATGCGGTGCTGGAGATGGAGCTCGACGAAGACCTCGACCT GGCGGACTACGAAGCCAACTTCCGTCGCATGTTCGGCAACGAGCGGATGGACGCGGTGATCGGCTCGGTGCAAGGCAGCGTGCGTTTTTACGGCCTGACC CCGACCAACATGCAGTTGGAAGGGCTCGATCGCCACCTGCGCCTGATCGACAGCTACAAGAAACTGCACGCGGCGCGCGCCAGGGCAGCAGCCCTCTCGC ACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGTCGACAAGCCTGGGGCCTGCGATCGCACGGACAGATAAGGTCCGGCAGGCCTTCAGGCTCGAGGAGTGGCAGGCCTCGGCCTATCGAGCAAAAACG CGTTGATAAACGGCATCCTTGCCAGCGCTTTTTCAGATCATCCGGCTGGGCAAGGCAGCCTCAATCCGACTCCAGGATCGTCCTCAGCAGCTCCTTGTTG CTTTTGCTTTTCATCTCGGGCGGCTTACTGTTGTCGATTATGTTCCTGCTTTCCGCCTCGGCGCAGGTGGCGAAGCCGAACGCAACGACTCGCTCCTCAC TGTTCACAGCCACATAATAATCGGCACTGCGCCCGTTTTTATCTAAAGAAAAATCGAGGCAAGTACCTTTAATATTCTTAGTTGGCTGTTCTCGTGTGGG TTTTACACCTGCTGCGAGAACCGACTGTTTTGTCGCACCCGCTTTAGATGAAGCAGTCACAACTGGATTGGATGAAAACGCCGTCAAGGTGCTAGCATTT
Amino Acid Sequence
>protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQTRDIPTDNIRLSQNNIVDPENRYNQIFKIQVELPADISEK DRLGILRSIDRCTVKKVVQTGPEFVIEEVENLDADAQALLMPGLESGTRTCIAGKDLPLEQTIANMSAILADLGMKIEIASWRNIVPNVWSLHIRDAQSP MCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGEEIANAEFVHYPDERWFKPGPKDELPSEILDPYCLKIYNRDGELRGSHLIDTNSGNAERGIV SLPFVRQSDGEVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREIIEGEFALPDVPQEVLAKYPGILAGIQGLEEQGFPVLVKDASLGGE FPVMCVTLMNPRTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFEGQAVTEPNNFVEHFIDSSGVVSWRFFSAQSDYEFVEWDFSGQGSD SNAQEAATLFGILEGMSKEAYMAVYEHLGATACRILVPDYSEIYPVDDLIWDNTNKALFFREDILNLHRLDEDELQALLERLIDSELDDYTDITTLIGIE FDDNTAWGQLTILELKLLIFLALQQYEEAKECVEMFLQYNDNTVERGLFYQAMNAVLEMELDEDLDLADYEANFRRMFGNERMDAVIGSVQGSVRFYGLT PTNMQLEGLDRHLRLIDSYKKLHAARARAAALSH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site