Strain | Pseudomonas sp. MRSN12121, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGGCTCGGCGGCCCGGGCCGCGGCCTTGGCGGCTTCGCTGCGTTCCTTGCGGGCGCTGGCGGCGCGCTCGATCGGCCAGCGGATCAGCACCAGGACCAGG TACAGGCCAAAGGCGATCATGCCGTACATGAACAGGTCGGAAACCGCGCGCCAGGCGTTGTTGCCGACCTTGAACAGCATGTCCAGGGCGGTGATGGCCA CGGCCGGGGCGTCCATGTTCTTCGCCGGGTCGACCACGGTCGGGCTGAACAGCAGCACAGCCACCAGCAGGCGCAGCGGCTCGCGCAGCCAGCGCCACAT CCAGCGGGTCAGGCGCATCCACACCAGCAGGCAGCCCAAGGCGGCGAAGGCATACAGCCCCCAGGCGATCAGATAGTCGTTCTCGGTCATGGTGTCCATG GCAAGGCAGGCAAAGAGGCGCTTATGATAACGGCTTTTCGCATGTCAGGCTGCCCCGCCGTCTGCCACGTCCTTATTTGTCATCGTCCCGAGAGCCCTCC
|
|
DNA Sequence for Gene |
>TO66_RS07445
ATGCCCGTAGCCGACCCCGTCATCGCCGCCCCCGTCGCCCGCAAGGCCGCAGGCCCGGATCCCTACGCCTGGCTCCAGGAGCGCGACACCGAGGCCGTGC TCGATTACCTGAAGGCCGAGAACCGCTACCAGGAAGCCGCCCTGGCCGACCAGGCGGCGCTGCGCGAAACCCTGTTCCAGGAAATCAAGGGGCGGATCCA GGAGACCGACCTGTCCCTGCCCTCGCCCTGGGGCCCCTACCTGTACTACACCCGCACCACCGCCGGCGACGAATATGCCCGCCACTACCGCTGCCCGCGC CCGGCCGACGACAGCCTCACCGTCGACGAAAGCCGCGAACAGCTGCTGCTGGACCCGAACGAGCTGGCCAATGGCGGGTTCTTCTCCCTCGGCGCCTTCA ACATCAGCCCCGACCACCAGCGCCTGGCCTACAGCCTCGATACCACGGGCGAAGAGGTCTACACGCTGTTCGTCAAGGAACTGTCCAACGGCAAGGTCAG CGAGCTGGACTTCGCCGATTGCGACGGCAGCATGACCTGGGCCAACGACAGCCTGACCCTGTTCTTCGCCGAACTGGACGACACCCATCGCCCGCACAAG CTGTTCCGCTATCGCCTGGATGGCACCGCCGCCGAGGAAGTCTTCCATGAACCGGACGGGCGGTTTTTCCTGCATTGCTACCGCTCAAGCTCCGAGAAAC AACTGCTGCTGTCCCTGAGCAGCAAGACCACCAGCGAGGTCTGGGTGCTCGACGCGGCGCAGCCGCAGCAAGCCTTCAGTTGCCTGGCGCCGCGGGTCGA GCACCATGAATACGACGTCGACCACGGCCTGCTCGATGGCCAGTGGACCTGGTTTATCCGCAGCAACCGCGACGGCATCAACTTCGCCCTCTACCAGGCG CCGGACCAGGGCCACGCGCCAGCCCAGGCCGACTGGCAGAACCTGATCCCCCACAGCGACAGCGTGATGCTCGAAGGCCTGAGCCTGAACAGCTCGGCCA TGACCCTGAGCCTGCGCGAAGGCGGCCTGCCGATCGTCGAGGTGCACCCCGAAGGCCTGCCGGCCTATCGCGTGCAATTGCCGGATGCCGCCTACAGCCT GCATGTGCAGAACAGCCTGGAGTTCGTCAGCCCGCGCATCCGCCTGCGCTACGAGGCCCTGAACCGCCCGGCGCAGATCCGCCAGCTGGAACTGGCCGGC GGCGAACAGAAGGTCCTCAAGGAAACCCCGGTGCTGGGCGATTTCGATCCGGACGCCTACGTCAGCCAGCGCCTGTGGGCGACCGCGGCCGACGGCACCC GGGTGCCGATCAGCCTGGTGATCAAGCGCGAAGCCCTGGGCCGGCCGGCGCCGTTGTACCTGTATGGCTACGGCGCCTACGGCGAAAGCCTCGACCCATG GTTTTCCCATGCCCGGCTGAGCCTGCTGGAGCGCGGCGTGGCCTTCGCCATCGCCCACGTGCGCGGCGGCGGCGAGCTGGGCGAAGCCTGGTACCGCGCC GGCAAGCAGGAGCACAAGCAGAACACCTTCAGCGACTTCATCGCCTGCGCCGAACACCTGATCGCCGAGGGCCTGACCCGCGCCGAGCAACTGGCCATCA GCGGCGGCAGCGCCGGCGGCCTGCTGATCGGCGCGGTGCTCAACCAGCGCCCGGAACTGTTCAAGGCGGCGATCGCCGAAGTGCCGTTCGTCGACGTGCT CAACACCATGCTCGACCCCGACCTGCCGCTGACCGTCACCGAATACGACGAATGGGGCAACCCCGAAGAGCCGCAGGTGTATGAGCGGATCAAGGCCTAT GCACCCTACGAGAATGTCGAGGCCAAGGCCTACCCCGCCACCCTGGTGATCGCCGGCTACAACGACAGCCGCGTGCAGTACTGGGAGGCGGCCAAATGGG TGGCCCGGTTGCGCGCCACCAAGACCGACGACAACCTGCTGCTGCTCAAGACCGAGCTGGGCGCCGGCCACGGCGGCATGAGCGGGCGTTACCAGGGATT GCGTGACGTAGCGCTCGAATACGCATTTGTTTTCAAGATCCTGGGCATCGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGAACTCCCGCCGGCGCTCCTGTCTTAACACCAGAGCGCCGGTTCCCGGCCATACTGCACAGGCCCGGAACCGCAACAGACACAAGAAAAAGACCGTGAC GACATGCCCGAACCTACCTTGTTGAACAACGAAATCCGCGACTGGCTGATGGACTGCGGACTGTTCGATCAACTCCTGCCGGCCGACTTCAATGCCGCCG CCGGCTATTTCAGTATCAGCAGCATTGCCCAGGGCCAGGAGATCTTCCGCGAGGGCGATGCCGGCAGTTTCATGTGCATCATCCATTCCGGCCAGGTGGC GGTGCAGAAGACCAACAGCGAAGGCGTGCGCGTGACCATCGCCACCCTGCGCAGCGGACGCGCCTTCGGCGAAATGGCGGTGCTCGACGGCGAGCGGCGC TCGGCCAGTTGCGTGGCCGCCAGCGATTGCCGGCTGCTCAACCTGGGCAAGGACTCGCTGGAAAAGATGCTCAACGACGCGCCGAAGATCGCCGCCAAGA
|
|
Amino Acid Sequence |
>peptidase S9
MPVADPVIAAPVARKAAGPDPYAWLQERDTEAVLDYLKAENRYQEAALADQAALRETLFQEIKGRIQETDLSLPSPWGPYLYYTRTTAGDEYARHYRCPR PADDSLTVDESREQLLLDPNELANGGFFSLGAFNISPDHQRLAYSLDTTGEEVYTLFVKELSNGKVSELDFADCDGSMTWANDSLTLFFAELDDTHRPHK LFRYRLDGTAAEEVFHEPDGRFFLHCYRSSSEKQLLLSLSSKTTSEVWVLDAAQPQQAFSCLAPRVEHHEYDVDHGLLDGQWTWFIRSNRDGINFALYQA PDQGHAPAQADWQNLIPHSDSVMLEGLSLNSSAMTLSLREGGLPIVEVHPEGLPAYRVQLPDAAYSLHVQNSLEFVSPRIRLRYEALNRPAQIRQLELAG GEQKVLKETPVLGDFDPDAYVSQRLWATAADGTRVPISLVIKREALGRPAPLYLYGYGAYGESLDPWFSHARLSLLERGVAFAIAHVRGGGELGEAWYRA GKQEHKQNTFSDFIACAEHLIAEGLTRAEQLAISGGSAGGLLIGAVLNQRPELFKAAIAEVPFVDVLNTMLDPDLPLTVTEYDEWGNPEEPQVYERIKAY APYENVEAKAYPATLVIAGYNDSRVQYWEAAKWVARLRATKTDDNLLLLKTELGAGHGGMSGRYQGLRDVALEYAFVFKILGIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|